Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2755
Experiment: MoYLS4 with Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,479,657 | + | DvMF_2754 | 0.16 | -0.2 | |
3,479,696 | - | DvMF_2754 | 0.22 | -0.4 | |
3,479,719 | + | DvMF_2754 | 0.25 | -0.4 | |
3,480,006 | - | DvMF_2754 | 0.65 | -0.3 | |
3,480,413 | + | -1.2 | |||
3,480,697 | + | DvMF_2755 | 0.23 | -2.7 | |
3,481,046 | + | -0.1 | |||
3,481,054 | - | -0.4 | |||
3,481,121 | + | -0.6 | |||
3,481,121 | + | -0.8 | |||
3,481,164 | + | -0.5 | |||
3,481,172 | - | -0.4 | |||
3,481,172 | - | +0.5 | |||
3,481,402 | - | -1.0 | |||
3,481,586 | + | purT | DvMF_2756 | 0.12 | -2.6 |
3,481,644 | - | purT | DvMF_2756 | 0.17 | +0.2 |
3,481,890 | + | purT | DvMF_2756 | 0.38 | -0.4 |
3,481,893 | - | purT | DvMF_2756 | 0.38 | -1.1 |
3,481,914 | - | purT | DvMF_2756 | 0.40 | -1.8 |
3,481,930 | + | purT | DvMF_2756 | 0.41 | -0.1 |
3,481,930 | + | purT | DvMF_2756 | 0.41 | -0.0 |
3,481,968 | + | purT | DvMF_2756 | 0.45 | -2.8 |
Or see this region's nucleotide sequence