Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2242
Experiment: MoYLS4 with Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,814,433 | + | DvMF_2241 | 0.45 | -0.8 | |
2,814,527 | + | DvMF_2241 | 0.53 | -0.4 | |
2,814,527 | + | DvMF_2241 | 0.53 | +0.8 | |
2,814,830 | - | DvMF_2241 | 0.78 | -0.8 | |
2,814,892 | + | DvMF_2241 | 0.83 | -2.2 | |
2,814,937 | + | DvMF_2241 | 0.86 | -2.7 | |
2,815,220 | - | -1.9 | |||
2,815,418 | + | -2.6 | |||
2,815,504 | - | DvMF_2242 | 0.10 | -0.1 | |
2,815,551 | + | DvMF_2242 | 0.15 | -2.4 | |
2,815,599 | - | DvMF_2242 | 0.19 | -0.2 | |
2,815,628 | - | DvMF_2242 | 0.22 | -1.8 | |
2,815,977 | + | DvMF_2242 | 0.54 | -1.0 | |
2,816,330 | - | DvMF_2242 | 0.87 | -0.1 | |
2,816,342 | + | DvMF_2242 | 0.88 | +0.3 | |
2,816,417 | + | -1.1 | |||
2,816,527 | + | -1.0 | |||
2,817,084 | + | -0.1 | |||
2,817,091 | - | -0.1 | |||
2,817,211 | + | DvMF_2243 | 0.13 | -1.6 |
Or see this region's nucleotide sequence