Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1983
Experiment: MoYLS4 with Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,453,771 | + | DvMF_1982 | 0.81 | -0.1 | |
| 2,453,896 | + | DvMF_1982 | 0.85 | +0.6 | |
| 2,453,904 | - | DvMF_1982 | 0.85 | -1.6 | |
| 2,453,917 | + | DvMF_1982 | 0.86 | -3.0 | |
| 2,453,963 | + | DvMF_1982 | 0.87 | +0.0 | |
| 2,453,963 | + | DvMF_1982 | 0.87 | -1.1 | |
| 2,454,048 | + | DvMF_1982 | 0.90 | -2.2 | |
| 2,454,156 | + | -1.3 | |||
| 2,454,569 | + | DvMF_1983 | 0.16 | +1.6 | |
| 2,454,858 | - | DvMF_1983 | 0.54 | -0.8 | |
| 2,454,897 | + | DvMF_1983 | 0.59 | +0.2 | |
| 2,455,255 | - | -0.7 | |||
| 2,455,255 | - | -1.0 | |||
| 2,455,269 | - | -0.3 | |||
| 2,455,274 | - | -1.1 | |||
| 2,455,386 | + | +0.6 | |||
| 2,455,542 | - | -0.6 | |||
| 2,455,542 | - | -0.3 | |||
| 2,455,775 | - | -0.8 | |||
| 2,455,782 | + | -1.1 | |||
| 2,455,821 | + | -1.0 | |||
| 2,456,103 | + | DvMF_1984 | 0.22 | -0.5 | |
| 2,456,163 | - | DvMF_1984 | 0.27 | -0.4 | |
| 2,456,180 | - | DvMF_1984 | 0.29 | -0.9 |
Or see this region's nucleotide sequence