Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1317
Experiment: MoYLS4 with Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,608,772 | - | DvMF_1316 | 0.34 | -0.8 | |
1,608,985 | + | DvMF_1316 | 0.54 | -1.8 | |
1,609,299 | + | DvMF_1316 | 0.83 | -1.3 | |
1,609,342 | - | DvMF_1316 | 0.87 | -0.1 | |
1,609,411 | - | -0.2 | |||
1,609,453 | + | -1.1 | |||
1,609,453 | + | -0.8 | |||
1,609,678 | + | -0.2 | |||
1,609,819 | - | DvMF_1317 | 0.28 | -0.1 | |
1,609,953 | + | DvMF_1317 | 0.46 | -0.4 | |
1,610,218 | + | DvMF_1317 | 0.81 | -0.0 | |
1,610,226 | - | DvMF_1317 | 0.82 | +1.2 | |
1,610,291 | + | -0.2 | |||
1,610,291 | + | -0.4 | |||
1,610,291 | + | -1.2 | |||
1,610,291 | + | -0.4 | |||
1,610,299 | - | -2.2 | |||
1,610,370 | - | +1.0 | |||
1,610,679 | + | DvMF_1318 | 0.57 | -1.0 | |
1,610,810 | - | DvMF_1318 | 0.80 | -0.9 | |
1,610,843 | + | DvMF_1318 | 0.85 | +0.6 | |
1,611,063 | - | +0.5 | |||
1,611,100 | + | -0.8 | |||
1,611,190 | + | +0.6 | |||
1,611,208 | - | -0.4 |
Or see this region's nucleotide sequence