Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1073
Experiment: MoYLS4 with Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,312,680 | - | DvMF_1072 | 0.51 | -0.7 | |
| 1,312,776 | - | DvMF_1072 | 0.56 | -0.5 | |
| 1,312,805 | + | DvMF_1072 | 0.58 | -1.1 | |
| 1,312,842 | - | DvMF_1072 | 0.60 | -0.4 | |
| 1,313,151 | + | DvMF_1072 | 0.77 | +2.4 | |
| 1,313,542 | + | +0.4 | |||
| 1,313,701 | + | DvMF_1073 | 0.58 | -1.2 | |
| 1,313,709 | - | DvMF_1073 | 0.62 | -0.5 | |
| 1,313,709 | - | DvMF_1073 | 0.62 | -4.3 | |
| 1,314,078 | + | -0.6 | |||
| 1,314,142 | - | -1.1 | |||
| 1,314,152 | - | -0.4 | |||
| 1,314,208 | + | -1.4 | |||
| 1,314,240 | + | -1.1 | |||
| 1,314,240 | + | -2.8 | |||
| 1,314,248 | - | -0.8 | |||
| 1,314,280 | + | -1.6 | |||
| 1,314,288 | - | -1.7 | |||
| 1,314,288 | - | -0.9 | |||
| 1,314,433 | - | +0.1 | |||
| 1,314,745 | + | DvMF_1074 | 0.36 | -0.6 |
Or see this region's nucleotide sequence