Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0961

Experiment: MoYLS4 with Vancomycin 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0960 and DvMF_0961 are separated by 12 nucleotidesDvMF_0961 and DvMF_0962 are separated by 164 nucleotidesDvMF_0962 and DvMF_0963 overlap by 4 nucleotides DvMF_0960: DvMF_0960 - UDP-N-acetylmuramyl-tripeptide synthetase (RefSeq), at 1,164,827 to 1,166,311 _0960 DvMF_0961: DvMF_0961 - Peptidoglycan glycosyltransferase (RefSeq), at 1,166,324 to 1,168,288 _0961 DvMF_0962: DvMF_0962 - hypothetical protein (RefSeq), at 1,168,453 to 1,168,740 _0962 DvMF_0963: DvMF_0963 - S-adenosyl-methyltransferase MraW (RefSeq), at 1,168,737 to 1,169,822 _0963 Position (kb) 1166 1167 1168 1169Strain fitness (log2 ratio) -1 0 1 2 3at 1166.322 kb on + strandat 1166.470 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Vancomycin 1 mg/ml
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1,166,322 + -0.3
1,166,470 - +3.5

Or see this region's nucleotide sequence