Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0955

Experiment: MoYLS4 with Vancomycin 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0953 and DvMF_0954 overlap by 10 nucleotidesDvMF_0954 and murC are separated by 1 nucleotidesmurC and murG are separated by 286 nucleotides DvMF_0953: DvMF_0953 - Polypeptide-transport-associated domain protein FtsQ-type (RefSeq), at 1,156,302 to 1,157,141 _0953 DvMF_0954: DvMF_0954 - UDP-N-acetylenolpyruvoylglucosamine reductase (RefSeq), at 1,157,132 to 1,158,052 _0954 DvMF_0955: murC - UDP-N-acetylmuramate--L-alanine ligase (RefSeq), at 1,158,054 to 1,159,421 murC DvMF_0956: murG - undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase (RefSeq), at 1,159,708 to 1,160,856 murG Position (kb) 1158 1159 1160Strain fitness (log2 ratio) -1 0 1at 1159.510 kb on - strandat 1159.555 kb on + strandat 1159.706 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Vancomycin 1 mg/ml
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1,159,510 - -1.1
1,159,555 + -0.7
1,159,706 - -0.9

Or see this region's nucleotide sequence