Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0831
Experiment: MoYLS4 with Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,002,913 | + | DvMF_0830 | 0.48 | -0.8 | |
1,002,985 | + | DvMF_0830 | 0.54 | -0.4 | |
1,002,993 | - | DvMF_0830 | 0.55 | -1.5 | |
1,003,000 | + | DvMF_0830 | 0.55 | -0.6 | |
1,003,113 | - | DvMF_0830 | 0.64 | -0.8 | |
1,003,147 | + | DvMF_0830 | 0.67 | -2.9 | |
1,003,324 | + | DvMF_0830 | 0.81 | -0.1 | |
1,003,329 | + | DvMF_0830 | 0.81 | -0.5 | |
1,003,362 | - | DvMF_0830 | 0.84 | -0.2 | |
1,003,459 | + | -0.2 | |||
1,003,477 | - | -1.7 | |||
1,003,796 | - | -1.1 | |||
1,003,863 | - | -1.1 | |||
1,003,965 | + | DvMF_0831 | 0.12 | -0.8 | |
1,003,997 | + | DvMF_0831 | 0.14 | -1.2 | |
1,003,997 | + | DvMF_0831 | 0.14 | +1.9 | |
1,004,005 | - | DvMF_0831 | 0.15 | -1.0 | |
1,004,085 | + | DvMF_0831 | 0.21 | -0.7 | |
1,004,210 | - | DvMF_0831 | 0.30 | -0.3 | |
1,004,212 | + | DvMF_0831 | 0.30 | +0.5 | |
1,004,212 | + | DvMF_0831 | 0.30 | +0.8 | |
1,004,233 | + | DvMF_0831 | 0.32 | -0.8 | |
1,004,505 | + | DvMF_0831 | 0.52 | -0.7 | |
1,004,742 | + | DvMF_0831 | 0.69 | -1.5 | |
1,004,742 | + | DvMF_0831 | 0.69 | -1.3 | |
1,004,743 | - | DvMF_0831 | 0.69 | +0.8 | |
1,005,042 | - | -0.5 | |||
1,005,238 | + | -0.9 | |||
1,005,246 | - | +0.4 | |||
1,005,436 | + | DvMF_0832 | 0.47 | +0.4 | |
1,005,705 | + | -1.1 | |||
1,005,723 | - | -0.5 | |||
1,005,795 | + | -0.5 | |||
1,005,838 | - | -0.1 |
Or see this region's nucleotide sequence