Experiment: MoYLS4 with Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0467 and DvMF_0468 are separated by 577 nucleotides DvMF_0468 and DvMF_0469 are separated by 194 nucleotides
DvMF_0467: DvMF_0467 - CheA signal transduction histidine kinase (RefSeq), at 545,226 to 547,400
_0467
DvMF_0468: DvMF_0468 - response regulator receiver protein (RefSeq), at 547,978 to 548,340
_0468
DvMF_0469: DvMF_0469 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 548,535 to 550,361
_0469
Position (kb) 547
548
549 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 547.135 kb on - strand, within DvMF_0467 at 547.162 kb on + strand, within DvMF_0467 at 547.255 kb on - strand at 547.497 kb on - strand at 547.655 kb on - strand at 547.825 kb on - strand at 547.846 kb on - strand at 547.851 kb on - strand at 548.154 kb on + strand, within DvMF_0468 at 548.154 kb on + strand, within DvMF_0468 at 548.154 kb on + strand, within DvMF_0468 at 548.162 kb on - strand, within DvMF_0468 at 548.246 kb on + strand, within DvMF_0468 at 548.265 kb on - strand, within DvMF_0468 at 548.285 kb on - strand, within DvMF_0468 at 548.285 kb on - strand, within DvMF_0468 at 548.304 kb on + strand at 548.343 kb on + strand at 548.401 kb on + strand at 548.401 kb on + strand at 548.470 kb on - strand at 548.812 kb on + strand, within DvMF_0469 at 548.844 kb on + strand, within DvMF_0469 at 548.852 kb on - strand, within DvMF_0469 at 548.979 kb on - strand, within DvMF_0469
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Vancomycin 1 mg/ml remove 547,135 - DvMF_0467 0.88 -0.9 547,162 + DvMF_0467 0.89 -0.2 547,255 - +0.1 547,497 - +0.8 547,655 - -3.3 547,825 - +0.5 547,846 - -0.0 547,851 - -0.6 548,154 + DvMF_0468 0.48 +0.8 548,154 + DvMF_0468 0.48 +1.0 548,154 + DvMF_0468 0.48 +2.7 548,162 - DvMF_0468 0.51 +3.0 548,246 + DvMF_0468 0.74 +3.4 548,265 - DvMF_0468 0.79 +1.4 548,285 - DvMF_0468 0.85 -0.7 548,285 - DvMF_0468 0.85 +1.6 548,304 + +2.0 548,343 + -1.0 548,401 + -1.0 548,401 + -0.1 548,470 - -0.9 548,812 + DvMF_0469 0.15 -0.1 548,844 + DvMF_0469 0.17 -1.1 548,852 - DvMF_0469 0.17 +0.4 548,979 - DvMF_0469 0.24 -0.6
Or see this region's nucleotide sequence