Experiment: MoYLS4 with Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0435 and DvMF_0436 are separated by 241 nucleotides DvMF_0436 and DvMF_0437 are separated by 260 nucleotides DvMF_0437 and DvMF_0438 are separated by 112 nucleotides DvMF_0438 and DvMF_0439 are separated by 0 nucleotides
DvMF_0435: DvMF_0435 - hypothetical protein (RefSeq), at 510,355 to 510,753
_0435
DvMF_0436: DvMF_0436 - hypothetical protein (RefSeq), at 510,995 to 511,432
_0436
DvMF_0437: DvMF_0437 - magnesium-translocating P-type ATPase (RefSeq), at 511,693 to 514,335
_0437
DvMF_0438: DvMF_0438 - hypothetical protein (RefSeq), at 514,448 to 514,726
_0438
DvMF_0439: DvMF_0439 - phosphoglyceromutase (RefSeq), at 514,727 to 516,400
_0439
Position (kb) 511
512
513
514
515 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 510.820 kb on - strand at 511.159 kb on - strand, within DvMF_0436 at 511.274 kb on + strand, within DvMF_0436 at 511.412 kb on - strand at 511.765 kb on - strand at 511.810 kb on + strand at 511.834 kb on + strand at 511.891 kb on - strand at 511.908 kb on + strand at 511.911 kb on - strand at 512.266 kb on + strand, within DvMF_0437 at 512.341 kb on - strand, within DvMF_0437 at 512.442 kb on + strand, within DvMF_0437 at 512.466 kb on - strand, within DvMF_0437 at 512.606 kb on - strand, within DvMF_0437 at 512.721 kb on - strand, within DvMF_0437 at 513.060 kb on - strand, within DvMF_0437 at 513.250 kb on - strand, within DvMF_0437 at 513.489 kb on + strand, within DvMF_0437 at 513.543 kb on + strand, within DvMF_0437 at 513.630 kb on - strand, within DvMF_0437 at 513.705 kb on + strand, within DvMF_0437 at 513.799 kb on - strand, within DvMF_0437 at 513.854 kb on - strand, within DvMF_0437 at 513.937 kb on + strand, within DvMF_0437 at 513.968 kb on + strand, within DvMF_0437 at 513.971 kb on - strand, within DvMF_0437 at 514.042 kb on - strand, within DvMF_0437 at 514.253 kb on - strand at 514.647 kb on - strand, within DvMF_0438
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Vancomycin 1 mg/ml remove 510,820 - -0.4 511,159 - DvMF_0436 0.37 -1.5 511,274 + DvMF_0436 0.64 -0.8 511,412 - -0.7 511,765 - -0.2 511,810 + -2.7 511,834 + -0.4 511,891 - -0.8 511,908 + -1.6 511,911 - -0.4 512,266 + DvMF_0437 0.22 +0.6 512,341 - DvMF_0437 0.25 -1.9 512,442 + DvMF_0437 0.28 -3.2 512,466 - DvMF_0437 0.29 -0.6 512,606 - DvMF_0437 0.35 -0.7 512,721 - DvMF_0437 0.39 -1.4 513,060 - DvMF_0437 0.52 -0.8 513,250 - DvMF_0437 0.59 -1.6 513,489 + DvMF_0437 0.68 -0.3 513,543 + DvMF_0437 0.70 -0.5 513,630 - DvMF_0437 0.73 -1.0 513,705 + DvMF_0437 0.76 -1.6 513,799 - DvMF_0437 0.80 -0.7 513,854 - DvMF_0437 0.82 -0.9 513,937 + DvMF_0437 0.85 -0.9 513,968 + DvMF_0437 0.86 +0.1 513,971 - DvMF_0437 0.86 +0.7 514,042 - DvMF_0437 0.89 -0.5 514,253 - -0.6 514,647 - DvMF_0438 0.71 -0.0
Or see this region's nucleotide sequence