Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0108
Experiment: MoYLS4 with Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
115,611 | - | DvMF_0107 | 0.29 | +1.3 | |
115,622 | - | DvMF_0107 | 0.30 | -0.8 | |
115,752 | + | DvMF_0107 | 0.43 | +1.1 | |
116,228 | + | DvMF_0107 | 0.88 | -0.8 | |
116,237 | - | DvMF_0107 | 0.89 | -0.5 | |
116,290 | + | +1.7 | |||
116,321 | + | -0.0 | |||
116,428 | - | -0.9 | |||
116,462 | - | DvMF_0108 | 0.11 | -0.8 | |
116,624 | - | DvMF_0108 | 0.28 | -0.8 | |
116,929 | - | DvMF_0108 | 0.60 | -0.5 | |
116,964 | + | DvMF_0108 | 0.64 | -0.5 | |
117,101 | + | DvMF_0108 | 0.78 | -2.4 | |
117,101 | + | DvMF_0108 | 0.78 | -0.6 | |
117,144 | - | DvMF_0108 | 0.82 | -1.2 | |
117,242 | - | -0.4 | |||
117,410 | + | -0.9 | |||
117,508 | - | -1.4 |
Or see this region's nucleotide sequence