Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4031

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
4,151,779	+		Ga0059261_4030	0.52	-2.2
4,151,779	+		Ga0059261_4030	0.52	-2.2
4,151,779	+		Ga0059261_4030	0.52	-3.4
4,151,779	+		Ga0059261_4030	0.52	-4.1
4,151,779	+		Ga0059261_4030	0.52	-2.8
4,151,779	+		Ga0059261_4030	0.52	-4.8
4,151,779	+		Ga0059261_4030	0.52	-3.7
4,151,780	-		Ga0059261_4030	0.52	-1.0
4,151,780	-		Ga0059261_4030	0.52	-3.3
4,151,780	-		Ga0059261_4030	0.52	-4.6
4,151,780	-		Ga0059261_4030	0.52	-4.9
4,151,780	-		Ga0059261_4030	0.52	-4.6
4,152,280	+				-3.5
4,152,280	+				-4.2
4,152,329	-				-4.0
4,152,329	-				-4.1
4,152,329	-				-4.5
4,152,329	-				-1.7
4,152,329	-				-3.5
4,152,329	-				-4.0
4,152,410	+				-0.5
4,152,423	-				+0.1
4,152,533	+				-3.7
4,152,533	+				-4.6
4,152,534	-				-2.2
4,152,534	-				-1.7
4,152,534	-				-0.3
4,152,582	-				-3.6
4,152,582	-				-2.2
4,152,582	-				-1.4
4,152,582	-				-3.2
4,152,740	+		Ga0059261_4031	0.19	-3.9
4,152,741	-		Ga0059261_4031	0.19	-2.8
4,152,741	-		Ga0059261_4031	0.19	-5.0
4,152,741	-		Ga0059261_4031	0.19	-2.3
4,152,741	-		Ga0059261_4031	0.19	-3.7
4,152,741	-		Ga0059261_4031	0.19	-3.7
4,152,779	+		Ga0059261_4031	0.22	-2.8
4,152,780	-		Ga0059261_4031	0.22	-0.5
4,152,805	-		Ga0059261_4031	0.23	-4.3
4,152,805	-		Ga0059261_4031	0.23	-2.2
4,152,805	-				-0.7
4,152,805	-		Ga0059261_4031	0.23	-6.0
4,152,913	+		Ga0059261_4031	0.30	-4.9
4,152,968	+		Ga0059261_4031	0.33	-4.4
4,152,968	+		Ga0059261_4031	0.33	-2.8
4,152,968	+		Ga0059261_4031	0.33	-4.1
4,152,968	+		Ga0059261_4031	0.33	-1.7
4,152,968	+		Ga0059261_4031	0.33	-3.0
4,152,968	+		Ga0059261_4031	0.33	-1.3
4,152,968	+		Ga0059261_4031	0.33	-1.5
4,152,969	-		Ga0059261_4031	0.33	-3.7
4,152,969	-		Ga0059261_4031	0.33	-1.3
4,152,969	-		Ga0059261_4031	0.33	-1.7
4,153,004	+		Ga0059261_4031	0.35	-3.6
4,153,005	-		Ga0059261_4031	0.35	-2.5
4,153,005	-		Ga0059261_4031	0.35	-4.4
4,153,005	-		Ga0059261_4031	0.35	-2.2
4,153,005	-		Ga0059261_4031	0.35	-3.3
4,153,019	+		Ga0059261_4031	0.36	-3.7
4,153,020	-		Ga0059261_4031	0.36	-3.2
4,153,020	-		Ga0059261_4031	0.36	-3.8
4,153,112	+		Ga0059261_4031	0.42	-5.1
4,153,112	+		Ga0059261_4031	0.42	-3.0
4,153,112	+		Ga0059261_4031	0.42	-0.7
4,153,113	-		Ga0059261_4031	0.42	-1.7
4,153,113	-		Ga0059261_4031	0.42	-2.9
4,153,113	-		Ga0059261_4031	0.42	-3.7
4,153,148	+		Ga0059261_4031	0.44	-2.8
4,153,149	-		Ga0059261_4031	0.44	-3.0
4,153,149	-		Ga0059261_4031	0.44	-3.9
4,153,149	-				-1.5
4,153,214	+		Ga0059261_4031	0.48	-3.2
4,153,214	+		Ga0059261_4031	0.48	-2.5
4,153,214	+		Ga0059261_4031	0.48	-4.7
4,153,214	+		Ga0059261_4031	0.48	-2.1
4,153,214	+		Ga0059261_4031	0.48	-3.1
4,153,214	+		Ga0059261_4031	0.48	-2.6
4,153,214	+		Ga0059261_4031	0.48	-1.0
4,153,214	+		Ga0059261_4031	0.48	-1.7
4,153,214	+		Ga0059261_4031	0.48	-2.8
4,153,214	+		Ga0059261_4031	0.48	-2.4
4,153,214	+		Ga0059261_4031	0.48	-4.9
4,153,215	-		Ga0059261_4031	0.48	-2.2
4,153,215	-		Ga0059261_4031	0.48	-5.1
4,153,215	-		Ga0059261_4031	0.48	-1.5
4,153,215	-		Ga0059261_4031	0.48	-3.6
4,153,215	-		Ga0059261_4031	0.48	-3.0
4,153,215	-		Ga0059261_4031	0.48	-4.4
4,153,215	-		Ga0059261_4031	0.48	-4.4
4,153,215	-		Ga0059261_4031	0.48	-3.5
4,153,348	-		Ga0059261_4031	0.56	-3.1
4,153,403	+		Ga0059261_4031	0.59	-3.1
4,153,403	+				+0.3
4,153,404	-		Ga0059261_4031	0.59	-3.8
4,153,404	-		Ga0059261_4031	0.59	-3.5
4,153,404	-		Ga0059261_4031	0.59	-4.4
4,153,421	+		Ga0059261_4031	0.60	-3.4
4,153,421	+		Ga0059261_4031	0.60	-5.5
4,153,421	+		Ga0059261_4031	0.60	-2.8
4,153,421	+		Ga0059261_4031	0.60	-1.5
4,153,421	+		Ga0059261_4031	0.60	-3.7
4,153,421	+		Ga0059261_4031	0.60	-3.8
4,153,421	+		Ga0059261_4031	0.60	-3.2
4,153,421	+		Ga0059261_4031	0.60	-3.2
4,153,422	-		Ga0059261_4031	0.60	-2.4
4,153,422	-		Ga0059261_4031	0.60	-2.5
4,153,422	-		Ga0059261_4031	0.60	-4.7
4,153,422	-		Ga0059261_4031	0.60	-3.2
4,153,422	-		Ga0059261_4031	0.60	-2.7
4,153,422	-		Ga0059261_4031	0.60	-3.0
4,153,422	-		Ga0059261_4031	0.60	-4.0
4,153,422	-		Ga0059261_4031	0.60	-4.5
4,153,422	-		Ga0059261_4031	0.60	-4.6
4,153,422	-		Ga0059261_4031	0.60	-2.7
4,153,422	-		Ga0059261_4031	0.60	-2.6
4,153,422	-		Ga0059261_4031	0.60	-3.3
4,153,566	-				-1.3
4,153,566	-		Ga0059261_4031	0.69	-2.8
4,153,566	-		Ga0059261_4031	0.69	-3.4
4,153,703	+		Ga0059261_4031	0.77	-1.1
4,153,703	+		Ga0059261_4031	0.77	-3.2
4,153,703	+		Ga0059261_4031	0.77	-3.7
4,153,703	+		Ga0059261_4031	0.77	-1.3
4,153,703	+		Ga0059261_4031	0.77	-1.9
4,153,703	+		Ga0059261_4031	0.77	-3.7
4,153,704	-		Ga0059261_4031	0.77	-1.9
4,153,704	-		Ga0059261_4031	0.77	-3.2
4,153,704	-		Ga0059261_4031	0.77	-3.9
4,153,704	-		Ga0059261_4031	0.77	-2.0
4,153,704	-		Ga0059261_4031	0.77	-3.6
4,153,704	-		Ga0059261_4031	0.77	-3.6
4,153,704	-		Ga0059261_4031	0.77	-3.6
4,153,704	-		Ga0059261_4031	0.77	-0.9
4,154,060	+				-2.0
4,154,136	+				-3.8
4,154,136	+				-1.4
4,154,136	+				-3.2
4,154,137	-				+0.1
4,154,137	-				+0.8
4,154,179	+				-1.9
4,154,189	+				-2.9
4,154,189	+				-4.1
4,154,190	-				-1.0
4,154,190	-				-0.2
4,154,240	-				-0.0
4,154,449	+				-0.3
4,154,449	+		Ga0059261_4032	0.29	-0.2
4,154,449	+		Ga0059261_4032	0.29	-0.2
4,154,450	-		Ga0059261_4032	0.30	+0.3
4,154,450	-		Ga0059261_4032	0.30	+0.5
4,154,514	+		Ga0059261_4032	0.46	-0.0
4,154,514	+		Ga0059261_4032	0.46	-0.2
4,154,514	+		Ga0059261_4032	0.46	-0.3
4,154,515	-		Ga0059261_4032	0.46	+0.6
4,154,515	-		Ga0059261_4032	0.46	-0.4
4,154,515	-		Ga0059261_4032	0.46	-0.6
4,154,515	-		Ga0059261_4032	0.46	+0.2
4,154,515	-		Ga0059261_4032	0.46	-0.7
4,154,711	-				+0.2
4,154,740	+				+0.2
4,154,740	+				-1.0
4,154,740	+				+0.5
4,154,741	-				+0.1
4,154,800	+				+0.4
4,154,800	+				-0.4
4,154,800	+				+0.2
4,154,800	+				-0.6
4,154,800	+				-0.2
4,154,800	+				+0.6
4,154,800	+				+0.2
4,154,800	+				-1.1
4,154,800	+				-0.0
4,154,800	+				+0.2
4,154,800	+				+1.3
4,154,800	+				-0.0
4,154,801	-				-0.2
4,154,801	-				+0.1
4,154,801	-				-0.2
4,154,801	-				-0.0
4,154,801	-				-0.4
4,154,801	-				-0.4
4,154,801	-				+0.3
4,154,801	-				-0.5
4,154,801	-				+0.1
4,154,801	-				-1.0
4,154,801	-				+0.3
4,154,801	-				+1.0
4,154,801	-				-0.4
4,154,896	+		Ga0059261_4033	0.24	-0.5
4,154,897	-		Ga0059261_4033	0.25	-0.4