Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1890

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
1,998,434	+		Ga0059261_1889	0.34	-0.1
1,998,434	+		Ga0059261_1889	0.34	+0.2
1,998,435	-		Ga0059261_1889	0.34	-0.8
1,998,435	-		Ga0059261_1889	0.34	-0.1
1,998,435	-		Ga0059261_1889	0.34	+0.5
1,998,521	+		Ga0059261_1889	0.41	+0.1
1,998,521	+		Ga0059261_1889	0.41	+1.1
1,998,521	+		Ga0059261_1889	0.41	+0.3
1,998,521	+		Ga0059261_1889	0.41	+0.6
1,998,521	+		Ga0059261_1889	0.41	+1.3
1,998,521	+		Ga0059261_1889	0.41	-0.4
1,998,521	+		Ga0059261_1889	0.41	+0.5
1,998,522	-		Ga0059261_1889	0.41	-0.5
1,998,522	-		Ga0059261_1889	0.41	-0.3
1,998,522	-		Ga0059261_1889	0.41	-0.7
1,998,522	-		Ga0059261_1889	0.41	-0.3
1,998,522	-		Ga0059261_1889	0.41	+0.6
1,998,522	-		Ga0059261_1889	0.41	+0.5
1,998,522	-		Ga0059261_1889	0.41	-1.3
1,998,555	-		Ga0059261_1889	0.44	-0.3
1,998,555	-		Ga0059261_1889	0.44	+0.6
1,998,653	+		Ga0059261_1889	0.53	+0.4
1,998,653	+		Ga0059261_1889	0.53	+0.5
1,998,653	+		Ga0059261_1889	0.53	+0.1
1,998,653	+		Ga0059261_1889	0.53	-0.6
1,998,653	+		Ga0059261_1889	0.53	+0.2
1,998,653	+		Ga0059261_1889	0.53	+0.4
1,998,653	+		Ga0059261_1889	0.53	+0.5
1,998,654	-		Ga0059261_1889	0.53	+0.7
1,998,654	-		Ga0059261_1889	0.53	+0.4
1,998,654	-		Ga0059261_1889	0.53	-0.4
1,998,654	-		Ga0059261_1889	0.53	-1.2
1,998,654	-		Ga0059261_1889	0.53	-0.1
1,998,654	-		Ga0059261_1889	0.53	-0.1
1,998,746	+		Ga0059261_1889	0.61	+0.4
1,998,747	-		Ga0059261_1889	0.62	+0.1
1,998,747	-		Ga0059261_1889	0.62	+0.2
1,998,747	-		Ga0059261_1889	0.62	-0.8
1,998,747	-		Ga0059261_1889	0.62	+0.3
1,998,785	+		Ga0059261_1889	0.65	+0.9
1,998,785	+		Ga0059261_1889	0.65	-0.4
1,998,785	+		Ga0059261_1889	0.65	-0.3
1,998,785	+		Ga0059261_1889	0.65	-0.8
1,998,786	-		Ga0059261_1889	0.65	-0.2
1,998,786	-		Ga0059261_1889	0.65	+0.0
1,998,786	-		Ga0059261_1889	0.65	+0.0
1,998,786	-		Ga0059261_1889	0.65	+0.0
1,998,786	-		Ga0059261_1889	0.65	-0.4
1,998,786	-		Ga0059261_1889	0.65	-1.3
1,998,786	-		Ga0059261_1889	0.65	+0.7
1,998,909	+		Ga0059261_1889	0.76	-0.7
1,998,945	-		Ga0059261_1889	0.79	-0.8
1,998,945	-				-1.5
1,998,945	-		Ga0059261_1889	0.79	-0.2
1,998,945	-		Ga0059261_1889	0.79	+0.1
1,999,082	+				+1.5
1,999,082	+				+0.1
1,999,082	+				+0.2
1,999,082	+				-0.5
1,999,082	+				+0.5
1,999,082	+				-0.4
1,999,082	+				-0.1
1,999,082	+				-0.1
1,999,083	-				-0.3
1,999,083	-				-0.1
1,999,083	-				+0.4
1,999,083	-				+0.7
1,999,083	-				+0.4
1,999,083	-				+0.5
1,999,083	-				-0.4
1,999,083	-				-0.8
1,999,083	-				-0.2
1,999,184	+				+0.5
1,999,288	+				-0.2
1,999,351	+				-0.1
1,999,351	+				-0.0
1,999,352	-				-0.9
1,999,352	-				+0.0
1,999,352	-				+0.2
1,999,352	-				+0.7
1,999,352	-				+0.3
1,999,352	-				-0.4
1,999,557	+		Ga0059261_1890	0.23	-0.4
1,999,557	+		Ga0059261_1890	0.23	-1.1
1,999,557	+		Ga0059261_1890	0.23	+0.7
1,999,557	+		Ga0059261_1890	0.23	-0.2
1,999,557	+		Ga0059261_1890	0.23	+0.4
1,999,558	-		Ga0059261_1890	0.24	-0.4
1,999,558	-		Ga0059261_1890	0.24	+1.0
1,999,641	-		Ga0059261_1890	0.31	-0.2
1,999,735	+		Ga0059261_1890	0.40	+0.2
1,999,735	+				-0.5
1,999,735	+		Ga0059261_1890	0.40	+0.1
1,999,735	+		Ga0059261_1890	0.40	-2.3
1,999,736	-		Ga0059261_1890	0.40	+0.2
1,999,736	-		Ga0059261_1890	0.40	+0.4
1,999,736	-		Ga0059261_1890	0.40	+0.7
1,999,736	-		Ga0059261_1890	0.40	+1.3
2,000,008	-		Ga0059261_1890	0.66	+0.3
2,000,008	-		Ga0059261_1890	0.66	+0.4
2,000,316	+				+0.5
2,000,317	-				+0.4
2,000,358	+				-0.3
2,000,363	+				-0.5
2,000,363	+				+0.2
2,000,363	+				+0.7
2,000,363	+				-0.3
2,000,363	+				+0.2
2,000,363	+				-0.3
2,000,363	+				-0.1
2,000,364	-				-1.1
2,000,364	-				+0.0
2,000,364	-				-1.6
2,000,364	-				-0.7
2,000,364	-				+0.0
2,000,364	-				+0.1
2,000,364	-				-0.3
2,000,394	+				+0.5
2,000,395	-				+0.0
2,000,395	-				-0.1
2,000,463	+				+0.1
2,000,464	-				-0.2
2,000,464	-				+0.3
2,000,521	+				+1.3
2,000,521	+				+1.9
2,000,815	+		Ga0059261_1891	0.27	+0.2
2,000,815	+		Ga0059261_1891	0.27	+1.3
2,000,815	+		Ga0059261_1891	0.27	+0.4
2,000,815	+		Ga0059261_1891	0.27	-1.1
2,000,816	-		Ga0059261_1891	0.27	+1.3
2,000,816	-		Ga0059261_1891	0.27	+0.1
2,000,816	-		Ga0059261_1891	0.27	-1.1
2,000,817	+		Ga0059261_1891	0.27	+0.1
2,000,817	+		Ga0059261_1891	0.27	-0.2
2,000,817	+		Ga0059261_1891	0.27	+0.7
2,000,817	+		Ga0059261_1891	0.27	-1.0
2,000,817	+		Ga0059261_1891	0.27	+0.5
2,000,818	-		Ga0059261_1891	0.27	-0.4
2,000,818	-		Ga0059261_1891	0.27	+0.1
2,000,818	-		Ga0059261_1891	0.27	-0.0
2,000,818	-		Ga0059261_1891	0.27	+0.0
2,000,914	+		Ga0059261_1891	0.34	+0.4
2,000,914	+		Ga0059261_1891	0.34	-0.4
2,000,914	+		Ga0059261_1891	0.34	+1.1
2,000,914	+		Ga0059261_1891	0.34	+0.5
2,000,914	+		Ga0059261_1891	0.34	+0.3
2,000,914	+		Ga0059261_1891	0.34	+0.4
2,000,915	-		Ga0059261_1891	0.34	-0.3
2,000,986	+		Ga0059261_1891	0.39	-0.1
2,000,986	+		Ga0059261_1891	0.39	-0.2
2,000,986	+		Ga0059261_1891	0.39	+0.3
2,000,986	+		Ga0059261_1891	0.39	-0.6
2,000,986	+		Ga0059261_1891	0.39	+0.8
2,000,986	+		Ga0059261_1891	0.39	+0.6
2,000,986	+		Ga0059261_1891	0.39	-0.4
2,000,987	-		Ga0059261_1891	0.39	-0.1
2,000,987	-		Ga0059261_1891	0.39	+2.1
2,000,987	-		Ga0059261_1891	0.39	+0.4
2,000,987	-		Ga0059261_1891	0.39	-1.1
2,000,987	-		Ga0059261_1891	0.39	+0.5
2,000,987	-		Ga0059261_1891	0.39	-0.7
2,000,987	-		Ga0059261_1891	0.39	-0.9
2,000,987	-		Ga0059261_1891	0.39	-0.7
2,000,987	-		Ga0059261_1891	0.39	-0.7
2,001,055	+		Ga0059261_1891	0.44	+0.3
2,001,055	+		Ga0059261_1891	0.44	-2.1
2,001,055	+		Ga0059261_1891	0.44	+0.8
2,001,055	+		Ga0059261_1891	0.44	-0.3
2,001,056	-		Ga0059261_1891	0.44	+0.4
2,001,056	-		Ga0059261_1891	0.44	-1.4
2,001,056	-		Ga0059261_1891	0.44	+0.8
2,001,056	-		Ga0059261_1891	0.44	+0.2
2,001,095	+		Ga0059261_1891	0.47	-0.1
2,001,095	+		Ga0059261_1891	0.47	-0.5
2,001,096	-		Ga0059261_1891	0.47	-0.9
2,001,212	+		Ga0059261_1891	0.55	-0.3
2,001,212	+		Ga0059261_1891	0.55	-1.2
2,001,283	+		Ga0059261_1891	0.60	+1.1
2,001,283	+		Ga0059261_1891	0.60	+0.4
2,001,283	+		Ga0059261_1891	0.60	+0.8
2,001,283	+		Ga0059261_1891	0.60	-0.6
2,001,283	+		Ga0059261_1891	0.60	-0.1
2,001,283	+		Ga0059261_1891	0.60	-0.2
2,001,283	+		Ga0059261_1891	0.60	-1.4
2,001,283	+		Ga0059261_1891	0.60	+0.3
2,001,283	+		Ga0059261_1891	0.60	+0.8
2,001,283	+		Ga0059261_1891	0.60	+0.4
2,001,284	-		Ga0059261_1891	0.60	-0.8
2,001,284	-		Ga0059261_1891	0.60	-1.6
2,001,284	-		Ga0059261_1891	0.60	+0.3
2,001,284	-		Ga0059261_1891	0.60	-0.2
2,001,284	-		Ga0059261_1891	0.60	-0.3
2,001,284	-		Ga0059261_1891	0.60	+1.1
2,001,284	-		Ga0059261_1891	0.60	+0.3
2,001,284	-		Ga0059261_1891	0.60	-0.1
2,001,284	-		Ga0059261_1891	0.60	-0.3
2,001,284	-		Ga0059261_1891	0.60	+0.9
2,001,284	-		Ga0059261_1891	0.60	-0.5
2,001,284	-		Ga0059261_1891	0.60	+0.3
2,001,284	-		Ga0059261_1891	0.60	-0.4
2,001,284	-		Ga0059261_1891	0.60	-0.1
2,001,284	-		Ga0059261_1891	0.60	-2.6
2,001,284	-		Ga0059261_1891	0.60	-0.4
2,001,284	-		Ga0059261_1891	0.60	-1.9
2,001,284	-		Ga0059261_1891	0.60	-0.6
2,001,286	+		Ga0059261_1891	0.60	-1.4
2,001,287	-		Ga0059261_1891	0.60	-0.3
2,001,287	-		Ga0059261_1891	0.60	+0.6
2,001,287	-		Ga0059261_1891	0.60	-0.8