Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02972

Experiment: PYE with Chloramphenicol 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0005 mg/ml
3,127,194	-		CCNA_02971	0.16	-2.3
3,127,215	-		CCNA_02971	0.18	-1.6
3,127,222	-		CCNA_02971	0.19	+1.0
3,127,233	+		CCNA_02971	0.20	-0.7
3,127,336	+		CCNA_02971	0.30	-1.0
3,127,336	+		CCNA_02971	0.30	-1.5
3,127,336	+		CCNA_02971	0.30	-1.4
3,127,344	-		CCNA_02971	0.31	+0.5
3,127,344	-		CCNA_02971	0.31	+0.4
3,127,344	-		CCNA_02971	0.31	-0.1
3,127,344	-		CCNA_02971	0.31	-0.5
3,127,344	-		CCNA_02971	0.31	+0.5
3,127,388	+		CCNA_02971	0.35	-1.8
3,127,391	-		CCNA_02971	0.36	+0.0
3,127,404	+		CCNA_02971	0.37	-0.2
3,127,404	+		CCNA_02971	0.37	-1.5
3,127,404	+		CCNA_02971	0.37	-0.2
3,127,404	+		CCNA_02971	0.37	+0.1
3,127,404	+		CCNA_02971	0.37	-0.3
3,127,412	-		CCNA_02971	0.38	-0.2
3,127,412	-		CCNA_02971	0.38	+1.9
3,127,412	-		CCNA_02971	0.38	-0.6
3,127,412	-		CCNA_02971	0.38	+0.4
3,127,412	-		CCNA_02971	0.38	-0.4
3,127,412	-		CCNA_02971	0.38	+0.4
3,127,429	+		CCNA_02971	0.39	+0.6
3,127,429	-		CCNA_02971	0.39	+0.5
3,127,429	-		CCNA_02971	0.39	-1.8
3,127,429	-		CCNA_02971	0.39	-0.3
3,127,434	+		CCNA_02971	0.40	-0.3
3,127,434	+		CCNA_02971	0.40	-0.6
3,127,442	-		CCNA_02971	0.41	+0.7
3,127,453	+		CCNA_02971	0.42	-0.9
3,127,455	-		CCNA_02971	0.42	-0.3
3,127,461	-		CCNA_02971	0.42	+0.1
3,127,535	+		CCNA_02971	0.50	-1.1
3,127,538	-		CCNA_02971	0.50	+0.1
3,127,573	-		CCNA_02971	0.53	+1.1
3,127,578	-		CCNA_02971	0.54	-0.2
3,127,594	+		CCNA_02971	0.55	+0.2
3,127,599	+		CCNA_02971	0.56	-0.1
3,127,599	+		CCNA_02971	0.56	+1.8
3,127,622	+		CCNA_02971	0.58	-0.3
3,127,628	+		CCNA_02971	0.59	+0.6
3,127,636	-		CCNA_02971	0.59	+0.3
3,127,641	-		CCNA_02971	0.60	-0.7
3,127,660	-		CCNA_02971	0.62	+0.5
3,127,660	-		CCNA_02971	0.62	+0.2
3,127,664	+		CCNA_02971	0.62	+0.2
3,127,664	+		CCNA_02971	0.62	-1.0
3,127,664	+		CCNA_02971	0.62	+0.3
3,127,672	-		CCNA_02971	0.63	+0.1
3,127,672	-		CCNA_02971	0.63	+1.1
3,127,672	-		CCNA_02971	0.63	+0.2
3,127,672	-		CCNA_02971	0.63	+1.1
3,127,672	-		CCNA_02971	0.63	+1.2
3,127,696	-		CCNA_02971	0.65	+0.1
3,127,729	-		CCNA_02971	0.68	+1.1
3,127,729	-		CCNA_02971	0.68	+0.2
3,127,828	+		CCNA_02971	0.78	-0.6
3,127,831	-		CCNA_02971	0.78	-0.5
3,127,837	-		CCNA_02971	0.79	+2.2
3,127,838	+		CCNA_02971	0.79	-1.5
3,127,884	+		CCNA_02971	0.83	-1.1
3,127,892	-		CCNA_02971	0.84	-0.7
3,127,902	+		CCNA_02971	0.85	-0.4
3,127,915	-		CCNA_02971	0.86	-0.8
3,127,946	+		CCNA_02971	0.90	-0.2
3,127,947	+		CCNA_02971	0.90	+0.4
3,127,947	+		CCNA_02971	0.90	+0.3
3,127,947	+		CCNA_02971	0.90	-1.8
3,127,947	+		CCNA_02971	0.90	+0.3
3,127,955	-				+0.8
3,127,955	-				+1.0
3,127,957	+				-0.9
3,127,959	-				-2.6
3,127,979	-				+0.2
3,127,979	-				-0.6
3,127,979	-				-0.5
3,127,979	-				-1.0
3,127,991	-				-1.0
3,127,991	-				+0.0
3,127,991	-				+0.5
3,128,000	-				+0.2
3,128,005	-				+1.2
3,128,143	+				+0.3
3,128,151	-				+0.6
3,128,229	-		CCNA_02972	0.16	-1.5
3,128,250	-		CCNA_02972	0.19	-2.2
3,128,296	-		CCNA_02972	0.27	-0.1
3,128,338	-		CCNA_02972	0.34	-0.3
3,128,404	-		CCNA_02972	0.44	+0.5
3,128,430	-		CCNA_02972	0.48	-0.8
3,128,430	-		CCNA_02972	0.48	-0.2
3,128,473	+		CCNA_02972	0.55	-2.7
3,128,481	-		CCNA_02972	0.57	-0.5
3,128,481	-		CCNA_02972	0.57	+0.9
3,128,481	-		CCNA_02972	0.57	+1.2
3,128,487	+		CCNA_02972	0.58	-0.5
3,128,487	+		CCNA_02972	0.58	-1.3
3,128,523	+		CCNA_02972	0.63	+0.2
3,128,531	-		CCNA_02972	0.65	-0.3
3,128,531	-		CCNA_02972	0.65	-0.4
3,128,531	-		CCNA_02972	0.65	-0.3
3,128,538	-		CCNA_02972	0.66	+0.4
3,128,574	+		CCNA_02972	0.72	+0.5
3,128,581	-		CCNA_02972	0.73	-1.2
3,128,610	+		CCNA_02972	0.77	+0.1
3,128,610	+		CCNA_02972	0.77	-1.0
3,128,610	+		CCNA_02972	0.77	-0.3
3,128,610	+		CCNA_02972	0.77	+0.2
3,128,610	+		CCNA_02972	0.77	+0.0
3,128,610	+		CCNA_02972	0.77	-1.0
3,128,610	+		CCNA_02972	0.77	+0.9
3,128,615	+		CCNA_02972	0.78	-0.7
3,128,618	-		CCNA_02972	0.79	-0.2
3,128,618	-		CCNA_02972	0.79	+0.2
3,128,618	-		CCNA_02972	0.79	+0.7
3,128,618	-		CCNA_02972	0.79	-1.2
3,128,618	-		CCNA_02972	0.79	-1.0
3,128,618	-		CCNA_02972	0.79	-1.3
3,128,618	-		CCNA_02972	0.79	-0.7
3,128,618	-		CCNA_02972	0.79	+0.4
3,128,618	-		CCNA_02972	0.79	-0.4
3,128,623	-		CCNA_02972	0.80	-1.3
3,128,623	-		CCNA_02972	0.80	-0.6
3,128,625	+		CCNA_02972	0.80	-0.6
3,128,628	-		CCNA_02972	0.80	-2.0
3,128,688	-				-0.7
3,128,704	+				+0.3
3,128,713	+				-1.5
3,128,717	+				-0.1
3,128,717	-				-1.8
3,128,726	+				+0.6
3,128,736	-				-1.2
3,128,736	-				-0.7
3,128,738	+				+0.1
3,128,738	+				-1.0
3,128,746	-				-2.2
3,128,753	-				-1.1
3,128,878	-		CCNA_02973	0.23	-1.7
3,128,884	+		CCNA_02973	0.25	+0.7
3,128,910	+		CCNA_02973	0.34	+0.9
3,128,921	-		CCNA_02973	0.38	-0.4
3,128,923	-		CCNA_02973	0.38	-0.8
3,128,930	+		CCNA_02973	0.41	-1.5
3,128,931	+		CCNA_02973	0.41	+0.2
3,128,936	+		CCNA_02973	0.43	+1.6
3,128,938	-		CCNA_02973	0.44	+0.6
3,128,938	-		CCNA_02973	0.44	-0.3
3,128,939	-		CCNA_02973	0.44	-0.4
3,128,949	-		CCNA_02973	0.47	-0.6
3,129,052	+		CCNA_02973	0.83	-0.9
3,129,052	+		CCNA_02973	0.83	+0.6
3,129,083	+				-1.5
3,129,083	+				+0.3
3,129,124	+				-0.3
3,129,129	+		CCNA_02974	0.11	-0.2
3,129,129	+		CCNA_02974	0.11	+0.4
3,129,145	+		CCNA_02974	0.17	-0.2
3,129,198	+		CCNA_02974	0.36	-2.1
3,129,198	+		CCNA_02974	0.36	+0.3
3,129,203	+		CCNA_02974	0.38	-1.4
3,129,203	+		CCNA_02974	0.38	+0.9
3,129,206	-		CCNA_02974	0.39	-1.3
3,129,208	+		CCNA_02974	0.39	+0.2
3,129,208	+		CCNA_02974	0.39	-1.8
3,129,208	+		CCNA_02974	0.39	-1.2
3,129,211	-		CCNA_02974	0.41	+0.3
3,129,211	-		CCNA_02974	0.41	-1.0
3,129,211	-		CCNA_02974	0.41	+0.9
3,129,211	-		CCNA_02974	0.41	+1.2
3,129,221	-		CCNA_02974	0.44	-0.2
3,129,221	-		CCNA_02974	0.44	-0.5
3,129,234	+		CCNA_02974	0.49	+0.4
3,129,242	-		CCNA_02974	0.52	-0.9
3,129,298	+		CCNA_02974	0.72	-0.7
3,129,306	-		CCNA_02974	0.75	+1.4
3,129,313	-		CCNA_02974	0.77	+0.2
3,129,360	+				+0.4
3,129,360	+				+1.2
3,129,360	+				+0.3
3,129,360	+				+1.4
3,129,360	+				-1.3
3,129,360	+				-0.9
3,129,360	+				-1.3
3,129,368	-				-1.4
3,129,368	-				-0.6
3,129,368	-				-1.5
3,129,368	-				-0.1
3,129,368	-				-0.1
3,129,368	-				-0.7
3,129,368	-				-1.5
3,129,368	-				-0.4
3,129,378	-				+0.4
3,129,455	-				-2.0
3,129,462	+				-0.1
3,129,468	-				-0.7
3,129,475	+				-0.7
3,129,480	+				-0.7
3,129,480	+				+0.2
3,129,480	+				-1.8
3,129,480	+				-0.2
3,129,480	+				+0.3
3,129,480	+				-0.5
3,129,483	-				-0.2
3,129,488	-				-0.7
3,129,552	+				-0.7
3,129,567	+				+0.3
3,129,575	+				-0.5
3,129,601	+		CCNA_02975	0.10	-0.7
3,129,609	-		CCNA_02975	0.11	+0.2
3,129,609	-		CCNA_02975	0.11	-1.7
3,129,644	+		CCNA_02975	0.12	-1.1
3,129,704	+		CCNA_02975	0.15	-0.4
3,129,714	+		CCNA_02975	0.16	+0.0
3,129,716	-		CCNA_02975	0.16	-1.2
3,129,723	+		CCNA_02975	0.16	-0.2
3,129,731	-		CCNA_02975	0.17	+0.6
3,129,731	-		CCNA_02975	0.17	-0.1