Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02239

Experiment: PYE with Chloramphenicol 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0005 mg/ml
2,387,571	+		CCNA_02237	0.72	-0.2
2,387,579	-		CCNA_02237	0.72	-0.9
2,387,725	+		CCNA_02237	0.79	-0.3
2,387,735	+		CCNA_02237	0.79	-0.5
2,387,740	+		CCNA_02237	0.80	-0.5
2,387,743	-		CCNA_02237	0.80	+2.0
2,387,748	-		CCNA_02237	0.80	-2.8
2,387,781	-		CCNA_02237	0.82	+0.7
2,387,806	-		CCNA_02237	0.83	-0.1
2,387,824	+		CCNA_02237	0.83	-0.6
2,387,833	-		CCNA_02237	0.84	+1.1
2,387,861	+		CCNA_02237	0.85	-1.4
2,387,865	+		CCNA_02237	0.85	+0.2
2,387,875	+		CCNA_02237	0.86	-0.6
2,387,880	+		CCNA_02237	0.86	-0.4
2,387,884	+		CCNA_02237	0.86	-1.7
2,387,884	+		CCNA_02237	0.86	+3.0
2,387,889	+		CCNA_02237	0.86	-1.3
2,387,892	-		CCNA_02237	0.87	+1.9
2,387,897	-		CCNA_02237	0.87	-2.1
2,387,920	+		CCNA_02237	0.88	-0.4
2,387,920	+		CCNA_02237	0.88	-0.6
2,388,040	+				-0.5
2,388,053	+				-0.6
2,388,176	+				+0.7
2,388,195	+				-0.1
2,388,195	+				-0.5
2,388,203	-				-0.6
2,388,208	-				-0.5
2,388,218	-				+0.8
2,388,251	+				-1.2
2,388,259	-				+1.0
2,388,291	+				-0.6
2,388,297	+				-1.3
2,388,299	-				-1.6
2,388,299	-				+0.7
2,388,305	-				-0.8
2,388,324	+				-1.6
2,388,346	-				-1.1
2,388,369	-		CCNA_02238	0.20	+0.1
2,388,371	-		CCNA_02238	0.21	+1.6
2,388,380	-		CCNA_02238	0.25	+0.2
2,388,461	+		CCNA_02238	0.64	-0.9
2,388,469	+		CCNA_02238	0.68	-0.9
2,388,469	+		CCNA_02238	0.68	+0.1
2,388,477	-		CCNA_02238	0.72	-1.8
2,388,477	-		CCNA_02238	0.72	-0.9
2,388,504	-		CCNA_02238	0.85	+0.3
2,388,528	+				-1.2
2,388,528	+				-2.2
2,388,540	+				+0.0
2,388,631	+				+0.0
2,388,665	-		CCNA_02239	0.10	-0.8
2,388,675	-		CCNA_02239	0.11	-1.4
2,388,680	-		CCNA_02239	0.12	-0.1
2,388,713	-		CCNA_02239	0.15	-2.2
2,388,748	-		CCNA_02239	0.18	-0.8
2,388,816	+		CCNA_02239	0.23	-1.5
2,388,924	+		CCNA_02239	0.33	+1.0
2,388,932	-		CCNA_02239	0.33	-0.2
2,388,932	-		CCNA_02239	0.33	-0.9
2,388,932	-		CCNA_02239	0.33	-1.7
2,388,932	-		CCNA_02239	0.33	+2.5
2,388,959	+		CCNA_02239	0.36	-2.2
2,388,967	-		CCNA_02239	0.36	-1.8
2,389,039	+		CCNA_02239	0.42	+0.7
2,389,064	+		CCNA_02239	0.45	-0.7
2,389,064	+		CCNA_02239	0.45	-1.7
2,389,064	+		CCNA_02239	0.45	-0.3
2,389,072	-		CCNA_02239	0.45	-0.2
2,389,149	+		CCNA_02239	0.52	+2.5
2,389,163	+				+1.9
2,389,173	-		CCNA_02239	0.54	-0.9
2,389,178	+		CCNA_02239	0.54	+0.7
2,389,218	-		CCNA_02239	0.58	+1.3
2,389,231	-		CCNA_02239	0.59	-1.5
2,389,252	-		CCNA_02239	0.61	-2.1
2,389,274	-		CCNA_02239	0.62	-0.4
2,389,282	+		CCNA_02239	0.63	-3.0
2,389,282	+		CCNA_02239	0.63	-2.1
2,389,282	+		CCNA_02239	0.63	-0.3
2,389,282	+		CCNA_02239	0.63	-1.9
2,389,283	+		CCNA_02239	0.63	-0.8
2,389,290	-		CCNA_02239	0.64	-2.5
2,389,290	-		CCNA_02239	0.64	+2.2
2,389,290	-		CCNA_02239	0.64	+0.9
2,389,290	-		CCNA_02239	0.64	-0.3
2,389,290	-		CCNA_02239	0.64	+1.1
2,389,290	-		CCNA_02239	0.64	+0.5
2,389,291	-		CCNA_02239	0.64	-1.5
2,389,313	+		CCNA_02239	0.66	+2.5
2,389,313	+		CCNA_02239	0.66	-0.8
2,389,313	+		CCNA_02239	0.66	-1.5
2,389,313	+		CCNA_02239	0.66	-0.7
2,389,313	+		CCNA_02239	0.66	+0.5
2,389,321	-		CCNA_02239	0.66	+0.0
2,389,321	-		CCNA_02239	0.66	-0.3
2,389,321	-		CCNA_02239	0.66	-1.5
2,389,321	-		CCNA_02239	0.66	-1.3
2,389,321	-		CCNA_02239	0.66	+0.0
2,389,321	-		CCNA_02239	0.66	-0.5
2,389,380	+		CCNA_02239	0.71	-0.1
2,389,383	-		CCNA_02239	0.72	-2.2
2,389,403	-		CCNA_02239	0.73	-0.7
2,389,431	+		CCNA_02239	0.76	-1.3
2,389,439	-		CCNA_02239	0.76	-1.2
2,389,439	-		CCNA_02239	0.76	-0.5
2,389,442	+		CCNA_02239	0.77	+0.1
2,389,509	+		CCNA_02239	0.82	-1.9
2,389,509	+		CCNA_02239	0.82	-0.6
2,389,514	+		CCNA_02239	0.83	-1.8
2,389,517	-		CCNA_02239	0.83	+0.1
2,389,524	+		CCNA_02239	0.84	-1.5
2,389,524	+		CCNA_02239	0.84	-2.6
2,389,524	+		CCNA_02239	0.84	-0.8
2,389,524	+		CCNA_02239	0.84	+0.2
2,389,527	-		CCNA_02239	0.84	-1.5
2,389,643	-				-1.0
2,389,646	-				-0.1
2,389,651	-				+0.5
2,389,681	+				+0.6
2,389,694	-				-0.6
2,389,723	+				+1.2
2,389,730	+				-1.5
2,389,760	+				+0.4
2,389,768	+				+1.2
2,389,770	+				-0.1
2,389,783	-				+0.2
2,389,792	+		CCNA_02240	0.10	+1.5
2,389,816	-		CCNA_02240	0.14	-0.1
2,389,857	-		CCNA_02240	0.19	-1.3
2,389,868	-		CCNA_02240	0.20	+1.6
2,389,893	+		CCNA_02240	0.24	+0.2
2,389,901	-				+1.5
2,389,966	+		CCNA_02240	0.33	-1.1
2,389,981	+		CCNA_02240	0.35	-1.2
2,390,045	+		CCNA_02240	0.43	-1.7
2,390,108	-		CCNA_02240	0.51	-1.5
2,390,122	+		CCNA_02240	0.53	-1.1
2,390,130	+		CCNA_02240	0.54	-0.5
2,390,160	-		CCNA_02240	0.58	-1.7
2,390,170	+		CCNA_02240	0.59	-2.1
2,390,178	-		CCNA_02240	0.60	+0.2
2,390,187	-		CCNA_02240	0.61	-0.4
2,390,222	-		CCNA_02240	0.66	+0.9
2,390,271	-		CCNA_02240	0.72	+0.0
2,390,330	+		CCNA_02240	0.80	-0.3
2,390,330	+		CCNA_02240	0.80	+0.4
2,390,400	-		CCNA_02240	0.89	+2.0
2,390,430	-				+0.3
2,390,444	+				-1.3
2,390,460	-				-0.6
2,390,490	-				+0.1
2,390,523	+				-0.6
2,390,535	+		CCNA_02241	0.11	-1.0
2,390,592	+		CCNA_02241	0.23	-0.6
2,390,605	-		CCNA_02241	0.26	-0.1
2,390,649	-		CCNA_02241	0.35	+2.0
2,390,682	-		CCNA_02241	0.42	-0.8