Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01639

Experiment: PYE with Chloramphenicol 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0005 mg/ml
1,758,650	+		CCNA_01638	0.37	-1.6
1,758,667	+		CCNA_01638	0.38	-1.4
1,758,714	+		CCNA_01638	0.41	-1.7
1,758,791	+		CCNA_01638	0.47	-1.2
1,758,816	+		CCNA_01638	0.49	+0.3
1,758,841	+		CCNA_01638	0.50	+2.2
1,758,841	+		CCNA_01638	0.50	-3.0
1,758,948	+		CCNA_01638	0.58	-2.3
1,758,948	+		CCNA_01638	0.58	-2.2
1,759,030	+		CCNA_01638	0.64	-2.1
1,759,107	+		CCNA_01638	0.69	-0.3
1,759,162	+		CCNA_01638	0.73	+0.6
1,759,167	+		CCNA_01638	0.74	-0.4
1,759,183	-		CCNA_01638	0.75	+2.7
1,759,277	+		CCNA_01638	0.82	-0.8
1,759,355	+		CCNA_01638	0.87	-0.7
1,759,415	+				-0.6
1,759,446	+				+0.7
1,759,446	+				-2.2
1,759,483	+				-0.9
1,759,519	+				-0.8
1,759,522	-				+0.7
1,759,529	+				-1.5
1,759,570	+				+2.2
1,759,604	+				+0.1
1,759,604	+				-0.4
1,759,613	-				-1.0
1,759,707	+				-0.1
1,759,710	-				-0.3
1,759,719	+				-0.8
1,759,727	-				-0.3
1,759,757	-				-0.9
1,759,788	+		CCNA_01639	0.11	+0.0
1,759,821	+		CCNA_01639	0.14	+0.6
1,759,822	+		CCNA_01639	0.14	+0.6
1,759,923	+		CCNA_01639	0.21	-1.9
1,759,923	+		CCNA_01639	0.21	-1.2
1,759,926	-		CCNA_01639	0.22	+2.2
1,759,967	+		CCNA_01639	0.25	-1.5
1,759,985	+		CCNA_01639	0.26	+0.0
1,759,985	+		CCNA_01639	0.26	-1.3
1,760,176	-		CCNA_01639	0.41	-0.1
1,760,187	+		CCNA_01639	0.42	+0.6
1,760,292	-		CCNA_01639	0.50	-0.9
1,760,344	-		CCNA_01639	0.54	-0.6
1,760,344	-		CCNA_01639	0.54	-0.1
1,760,486	+		CCNA_01639	0.64	-0.2
1,760,486	+		CCNA_01639	0.64	+1.0
1,760,494	-		CCNA_01639	0.65	-0.6
1,760,625	+		CCNA_01639	0.75	-1.8
1,760,633	-		CCNA_01639	0.76	+1.2
1,760,638	+		CCNA_01639	0.76	+0.4
1,760,694	+		CCNA_01639	0.80	+0.2
1,760,717	+		CCNA_01639	0.82	-0.2
1,760,740	+		CCNA_01639	0.84	+2.4
1,760,811	+		CCNA_01639	0.89	-0.9
1,760,919	+				-1.6
1,761,029	-				-0.2
1,761,047	-				+0.0
1,761,056	-				-1.0
1,761,058	+				-0.5
1,761,066	-				-1.8
1,761,150	-		CCNA_01640	0.17	+0.4
1,761,160	+		CCNA_01640	0.18	-1.3
1,761,217	+		CCNA_01640	0.24	-1.7
1,761,235	+		CCNA_01640	0.25	+1.1
1,761,277	-		CCNA_01640	0.30	-0.6
1,761,323	-		CCNA_01640	0.35	+0.9
1,761,323	-		CCNA_01640	0.35	-1.3
1,761,325	+		CCNA_01640	0.35	+1.2
1,761,345	-		CCNA_01640	0.37	-1.8
1,761,352	-		CCNA_01640	0.38	-0.8
1,761,355	+		CCNA_01640	0.38	+0.3
1,761,362	+		CCNA_01640	0.39	-2.0
1,761,370	-		CCNA_01640	0.39	-0.7
1,761,379	-		CCNA_01640	0.40	-0.6
1,761,384	-		CCNA_01640	0.41	-1.0
1,761,415	+		CCNA_01640	0.44	+1.2
1,761,423	-		CCNA_01640	0.45	-0.7
1,761,429	-		CCNA_01640	0.46	-0.5
1,761,429	-		CCNA_01640	0.46	-0.6
1,761,443	-		CCNA_01640	0.47	-1.0
1,761,450	+		CCNA_01640	0.48	+0.2
1,761,482	+		CCNA_01640	0.51	-1.4
1,761,482	+		CCNA_01640	0.51	-0.4
1,761,482	+		CCNA_01640	0.51	+1.4
1,761,489	-		CCNA_01640	0.52	+0.0
1,761,490	-		CCNA_01640	0.52	+0.0
1,761,490	-		CCNA_01640	0.52	+0.5
1,761,509	+		CCNA_01640	0.54	-0.7
1,761,509	+		CCNA_01640	0.54	-1.0
1,761,517	-		CCNA_01640	0.55	-2.2
1,761,519	+		CCNA_01640	0.55	-0.3
1,761,537	-		CCNA_01640	0.57	-1.3
1,761,542	-		CCNA_01640	0.57	-0.1
1,761,574	-		CCNA_01640	0.61	-0.8
1,761,694	+		CCNA_01640	0.73	-0.2
1,761,708	-		CCNA_01640	0.75	+0.0
1,761,721	+		CCNA_01640	0.76	+0.0
1,761,729	-		CCNA_01640	0.77	-0.3
1,761,773	-		CCNA_01640	0.81	+0.2
1,761,784	+		CCNA_01640	0.82	-1.6
1,761,792	-		CCNA_01640	0.83	+0.2
1,761,821	-		CCNA_01640	0.86	+0.9
1,761,888	-				-0.8
1,761,901	+				-0.8
1,761,909	-				+0.2
1,761,909	-				-0.7
1,761,923	+				-0.5
1,761,931	-				-2.0