Experiment: benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27255 and AO353_27260 are separated by 97 nucleotides AO353_27260 and AO353_27265 overlap by 26 nucleotides AO353_27265 and AO353_27270 are separated by 9 nucleotides
AO353_27255: AO353_27255 - late control protein, at 5,960,924 to 5,961,970
_27255
AO353_27260: AO353_27260 - phage tail protein, at 5,962,068 to 5,962,274
_27260
AO353_27265: AO353_27265 - phage tail protein, at 5,962,249 to 5,963,094
_27265
AO353_27270: AO353_27270 - tail tape measure protein, at 5,963,104 to 5,965,953
_27270
Position (kb)
5962
5963 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5961.069 kb on + strand, within AO353_27255 at 5961.069 kb on + strand, within AO353_27255 at 5961.069 kb on + strand, within AO353_27255 at 5961.070 kb on - strand, within AO353_27255 at 5961.070 kb on - strand, within AO353_27255 at 5961.070 kb on - strand, within AO353_27255 at 5961.106 kb on + strand, within AO353_27255 at 5961.233 kb on - strand, within AO353_27255 at 5961.233 kb on - strand, within AO353_27255 at 5961.233 kb on - strand, within AO353_27255 at 5961.233 kb on - strand, within AO353_27255 at 5961.496 kb on - strand, within AO353_27255 at 5961.524 kb on - strand, within AO353_27255 at 5961.595 kb on + strand, within AO353_27255 at 5961.789 kb on + strand, within AO353_27255 at 5961.790 kb on - strand, within AO353_27255 at 5962.082 kb on + strand at 5962.082 kb on + strand at 5962.082 kb on + strand at 5962.083 kb on - strand at 5962.083 kb on - strand at 5962.083 kb on - strand at 5962.213 kb on + strand, within AO353_27260 at 5962.214 kb on - strand, within AO353_27260 at 5962.351 kb on - strand, within AO353_27265 at 5962.385 kb on + strand, within AO353_27265 at 5962.450 kb on + strand, within AO353_27265 at 5962.450 kb on + strand, within AO353_27265 at 5962.451 kb on - strand, within AO353_27265 at 5962.619 kb on + strand, within AO353_27265 at 5962.619 kb on + strand, within AO353_27265 at 5962.696 kb on - strand, within AO353_27265 at 5962.822 kb on + strand, within AO353_27265 at 5962.822 kb on + strand, within AO353_27265 at 5962.822 kb on + strand, within AO353_27265 at 5962.854 kb on - strand, within AO353_27265 at 5962.894 kb on + strand, within AO353_27265 at 5963.058 kb on - strand at 5963.085 kb on + strand at 5963.085 kb on + strand at 5963.085 kb on + strand at 5963.085 kb on + strand at 5963.085 kb on + strand at 5963.085 kb on + strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.105 kb on + strand at 5963.238 kb on + strand at 5963.238 kb on + strand at 5963.239 kb on - strand at 5963.250 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction benzoic 0.58 mg/ml remove 5,961,069 + AO353_27255 0.14 +1.6 5,961,069 + AO353_27255 0.14 -0.2 5,961,069 + AO353_27255 0.14 -0.3 5,961,070 - AO353_27255 0.14 +1.8 5,961,070 - AO353_27255 0.14 +0.9 5,961,070 - AO353_27255 0.14 +0.9 5,961,106 + AO353_27255 0.17 +0.7 5,961,233 - AO353_27255 0.30 -1.3 5,961,233 - AO353_27255 0.30 +0.3 5,961,233 - AO353_27255 0.30 -1.0 5,961,233 - AO353_27255 0.30 -0.8 5,961,496 - AO353_27255 0.55 +2.3 5,961,524 - AO353_27255 0.57 +0.6 5,961,595 + AO353_27255 0.64 +0.2 5,961,789 + AO353_27255 0.83 +0.9 5,961,790 - AO353_27255 0.83 -1.7 5,962,082 + +0.3 5,962,082 + -1.0 5,962,082 + +0.1 5,962,083 - +0.8 5,962,083 - -0.3 5,962,083 - +0.1 5,962,213 + AO353_27260 0.70 +1.3 5,962,214 - AO353_27260 0.71 -0.1 5,962,351 - AO353_27265 0.12 -0.5 5,962,385 + AO353_27265 0.16 -0.3 5,962,450 + AO353_27265 0.24 +0.1 5,962,450 + AO353_27265 0.24 -0.1 5,962,451 - AO353_27265 0.24 -0.7 5,962,619 + AO353_27265 0.44 -0.3 5,962,619 + AO353_27265 0.44 -0.0 5,962,696 - AO353_27265 0.53 -0.3 5,962,822 + AO353_27265 0.68 -0.7 5,962,822 + AO353_27265 0.68 -1.3 5,962,822 + AO353_27265 0.68 -0.2 5,962,854 - AO353_27265 0.72 +0.8 5,962,894 + AO353_27265 0.76 +2.3 5,963,058 - +1.5 5,963,085 + +0.2 5,963,085 + +0.0 5,963,085 + +0.5 5,963,085 + -0.1 5,963,085 + -0.8 5,963,085 + -1.4 5,963,086 - +0.0 5,963,086 - -0.3 5,963,086 - -1.3 5,963,086 - +0.9 5,963,086 - +1.7 5,963,086 - -0.7 5,963,086 - -2.1 5,963,086 - +0.0 5,963,086 - +0.7 5,963,086 - -0.4 5,963,086 - +0.1 5,963,087 + -0.6 5,963,087 + -1.6 5,963,087 + -0.3 5,963,087 + -0.4 5,963,087 + -0.7 5,963,087 + -0.1 5,963,087 + -1.4 5,963,087 + -1.0 5,963,087 + +0.5 5,963,087 + -1.0 5,963,087 + -0.3 5,963,088 - -2.0 5,963,088 - -1.5 5,963,088 - +0.7 5,963,088 - +0.6 5,963,088 - -0.9 5,963,088 - +1.3 5,963,088 - +1.2 5,963,088 - -1.5 5,963,088 - +0.3 5,963,088 - -0.3 5,963,088 - +0.2 5,963,088 - +1.1 5,963,105 + +0.3 5,963,238 + -0.4 5,963,238 + +1.1 5,963,239 - +0.0 5,963,250 - +0.1
Or see this region's nucleotide sequence