Experiment: benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27240 and AO353_27245 are separated by 150 nucleotides AO353_27245 and AO353_27250 overlap by 19 nucleotides
AO353_27240: AO353_27240 - restriction endonuclease subunit M, at 5,958,744 to 5,959,538
_27240
AO353_27245: AO353_27245 - lysozyme, at 5,959,689 to 5,960,234
_27245
AO353_27250: AO353_27250 - glycoside hydrolase family 19, at 5,960,216 to 5,960,875
_27250
Position (kb)
5958
5959
5960 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5957.798 kb on - strand at 5957.803 kb on - strand at 5957.881 kb on + strand at 5957.885 kb on + strand at 5957.886 kb on - strand at 5957.886 kb on - strand at 5957.898 kb on - strand at 5957.903 kb on + strand at 5957.945 kb on - strand at 5957.979 kb on + strand at 5957.979 kb on + strand at 5957.984 kb on - strand at 5958.059 kb on - strand at 5958.122 kb on + strand at 5958.122 kb on + strand at 5958.123 kb on - strand at 5958.126 kb on + strand at 5958.127 kb on - strand at 5958.127 kb on - strand at 5958.149 kb on - strand at 5958.214 kb on + strand at 5958.231 kb on - strand at 5958.232 kb on + strand at 5958.259 kb on - strand at 5958.502 kb on + strand at 5958.502 kb on + strand at 5958.503 kb on - strand at 5958.503 kb on - strand at 5958.503 kb on - strand at 5958.522 kb on + strand at 5958.522 kb on + strand at 5958.523 kb on - strand at 5958.523 kb on - strand at 5958.551 kb on + strand at 5958.552 kb on - strand at 5958.564 kb on + strand at 5958.564 kb on + strand at 5958.564 kb on + strand at 5958.564 kb on + strand at 5958.565 kb on - strand at 5958.565 kb on - strand at 5958.616 kb on - strand at 5958.674 kb on - strand at 5958.674 kb on - strand at 5958.674 kb on - strand at 5958.676 kb on + strand at 5958.676 kb on + strand at 5958.676 kb on + strand at 5958.677 kb on - strand at 5958.677 kb on - strand at 5958.717 kb on + strand at 5958.726 kb on + strand at 5958.726 kb on + strand at 5958.726 kb on + strand at 5958.726 kb on + strand at 5958.726 kb on + strand at 5958.727 kb on - strand at 5958.727 kb on - strand at 5958.727 kb on - strand at 5958.745 kb on + strand at 5958.745 kb on + strand at 5958.745 kb on + strand at 5958.745 kb on + strand at 5958.746 kb on - strand at 5958.746 kb on - strand at 5958.759 kb on + strand at 5958.759 kb on + strand at 5958.759 kb on + strand at 5958.759 kb on + strand at 5958.760 kb on - strand at 5958.760 kb on - strand at 5958.760 kb on - strand at 5958.831 kb on - strand, within AO353_27240 at 5958.831 kb on - strand, within AO353_27240 at 5958.920 kb on + strand, within AO353_27240 at 5958.920 kb on + strand, within AO353_27240 at 5958.920 kb on + strand, within AO353_27240 at 5958.920 kb on + strand, within AO353_27240 at 5958.920 kb on + strand, within AO353_27240 at 5958.920 kb on + strand, within AO353_27240 at 5958.921 kb on - strand, within AO353_27240 at 5958.921 kb on - strand, within AO353_27240 at 5958.921 kb on - strand, within AO353_27240 at 5959.018 kb on + strand, within AO353_27240 at 5959.018 kb on + strand, within AO353_27240 at 5959.018 kb on + strand, within AO353_27240 at 5959.018 kb on + strand, within AO353_27240 at 5959.018 kb on + strand, within AO353_27240 at 5959.018 kb on + strand, within AO353_27240 at 5959.019 kb on - strand, within AO353_27240 at 5959.019 kb on - strand, within AO353_27240 at 5959.019 kb on - strand, within AO353_27240 at 5959.019 kb on - strand, within AO353_27240 at 5959.019 kb on - strand, within AO353_27240 at 5959.043 kb on - strand, within AO353_27240 at 5959.081 kb on + strand, within AO353_27240 at 5959.081 kb on + strand, within AO353_27240 at 5959.081 kb on + strand, within AO353_27240 at 5959.081 kb on + strand, within AO353_27240 at 5959.081 kb on + strand, within AO353_27240 at 5959.081 kb on + strand, within AO353_27240 at 5959.081 kb on + strand, within AO353_27240 at 5959.081 kb on + strand, within AO353_27240 at 5959.082 kb on - strand, within AO353_27240 at 5959.082 kb on - strand, within AO353_27240 at 5959.082 kb on - strand, within AO353_27240 at 5959.082 kb on - strand, within AO353_27240 at 5959.214 kb on - strand, within AO353_27240 at 5959.420 kb on + strand, within AO353_27240 at 5959.420 kb on + strand, within AO353_27240 at 5959.420 kb on + strand, within AO353_27240 at 5959.420 kb on + strand, within AO353_27240 at 5959.421 kb on - strand, within AO353_27240 at 5959.421 kb on - strand, within AO353_27240 at 5959.453 kb on + strand, within AO353_27240 at 5959.453 kb on + strand, within AO353_27240 at 5959.453 kb on + strand, within AO353_27240 at 5959.453 kb on + strand, within AO353_27240 at 5959.453 kb on + strand, within AO353_27240 at 5959.454 kb on - strand, within AO353_27240 at 5959.454 kb on - strand, within AO353_27240 at 5959.532 kb on + strand at 5959.532 kb on + strand at 5959.532 kb on + strand at 5959.532 kb on + strand at 5959.532 kb on + strand at 5959.532 kb on + strand at 5959.533 kb on - strand at 5959.533 kb on - strand at 5959.533 kb on - strand at 5959.538 kb on + strand at 5959.538 kb on + strand at 5959.538 kb on + strand at 5959.538 kb on + strand at 5959.538 kb on + strand at 5959.538 kb on + strand at 5959.538 kb on + strand at 5959.538 kb on + strand at 5959.539 kb on - strand at 5959.539 kb on - strand at 5959.559 kb on + strand at 5959.717 kb on + strand at 5959.717 kb on + strand at 5959.717 kb on + strand at 5959.718 kb on - strand at 5959.718 kb on - strand at 5959.894 kb on - strand, within AO353_27245 at 5959.975 kb on + strand, within AO353_27245 at 5959.975 kb on + strand, within AO353_27245 at 5959.975 kb on + strand, within AO353_27245 at 5959.975 kb on + strand, within AO353_27245 at 5959.976 kb on - strand, within AO353_27245 at 5959.976 kb on - strand, within AO353_27245 at 5959.998 kb on + strand, within AO353_27245 at 5960.109 kb on + strand, within AO353_27245 at 5960.109 kb on + strand, within AO353_27245 at 5960.109 kb on + strand, within AO353_27245 at 5960.110 kb on - strand, within AO353_27245 at 5960.110 kb on - strand, within AO353_27245 at 5960.110 kb on - strand, within AO353_27245 at 5960.234 kb on + strand at 5960.234 kb on + strand at 5960.234 kb on + strand at 5960.234 kb on + strand at 5960.234 kb on + strand at 5960.234 kb on + strand at 5960.234 kb on + strand at 5960.234 kb on + strand at 5960.234 kb on + strand at 5960.234 kb on + strand at 5960.234 kb on + strand at 5960.234 kb on + strand at 5960.234 kb on + strand at 5960.234 kb on + strand at 5960.235 kb on - strand at 5960.235 kb on - strand at 5960.235 kb on - strand at 5960.235 kb on - strand at 5960.235 kb on - strand at 5960.235 kb on - strand at 5960.235 kb on - strand at 5960.235 kb on - strand at 5960.235 kb on - strand at 5960.364 kb on + strand, within AO353_27250
Per-strain Table
Position Strand Gene LocusTag Fraction benzoic 0.58 mg/ml remove 5,957,798 - +1.0 5,957,803 - -0.7 5,957,881 + -0.7 5,957,885 + +0.5 5,957,886 - -0.4 5,957,886 - -0.1 5,957,898 - -1.3 5,957,903 + -1.9 5,957,945 - +2.1 5,957,979 + -0.5 5,957,979 + -1.3 5,957,984 - -1.2 5,958,059 - +0.2 5,958,122 + +0.7 5,958,122 + -0.1 5,958,123 - +0.9 5,958,126 + +0.1 5,958,127 - +0.0 5,958,127 - +0.5 5,958,149 - +2.1 5,958,214 + +0.3 5,958,231 - -1.0 5,958,232 + -0.2 5,958,259 - +1.0 5,958,502 + -1.1 5,958,502 + +0.9 5,958,503 - +0.5 5,958,503 - +0.9 5,958,503 - -1.0 5,958,522 + +1.5 5,958,522 + -0.1 5,958,523 - -0.0 5,958,523 - +0.6 5,958,551 + -0.4 5,958,552 - -1.4 5,958,564 + -1.9 5,958,564 + +1.0 5,958,564 + -0.0 5,958,564 + -0.6 5,958,565 - +1.6 5,958,565 - +0.0 5,958,616 - +0.1 5,958,674 - +0.3 5,958,674 - +0.2 5,958,674 - -1.5 5,958,676 + -0.3 5,958,676 + +0.5 5,958,676 + +0.2 5,958,677 - +0.8 5,958,677 - -1.5 5,958,717 + +0.3 5,958,726 + -0.4 5,958,726 + +0.1 5,958,726 + +0.9 5,958,726 + +1.3 5,958,726 + +0.3 5,958,727 - -1.3 5,958,727 - -0.3 5,958,727 - -1.1 5,958,745 + +0.5 5,958,745 + +0.6 5,958,745 + +0.0 5,958,745 + +0.8 5,958,746 - +2.1 5,958,746 - -0.5 5,958,759 + +1.8 5,958,759 + +0.3 5,958,759 + -0.5 5,958,759 + -2.5 5,958,760 - +0.6 5,958,760 - +0.7 5,958,760 - +0.2 5,958,831 - AO353_27240 0.11 -1.6 5,958,831 - AO353_27240 0.11 -1.5 5,958,920 + AO353_27240 0.22 -0.3 5,958,920 + AO353_27240 0.22 +0.5 5,958,920 + AO353_27240 0.22 +1.9 5,958,920 + AO353_27240 0.22 -0.4 5,958,920 + AO353_27240 0.22 +0.3 5,958,920 + AO353_27240 0.22 -0.3 5,958,921 - AO353_27240 0.22 +0.9 5,958,921 - AO353_27240 0.22 +0.4 5,958,921 - AO353_27240 0.22 +0.5 5,959,018 + AO353_27240 0.34 +1.5 5,959,018 + AO353_27240 0.34 -0.6 5,959,018 + AO353_27240 0.34 +0.5 5,959,018 + AO353_27240 0.34 -0.4 5,959,018 + AO353_27240 0.34 -0.4 5,959,018 + AO353_27240 0.34 +0.9 5,959,019 - AO353_27240 0.35 +0.1 5,959,019 - AO353_27240 0.35 -0.1 5,959,019 - AO353_27240 0.35 -1.5 5,959,019 - AO353_27240 0.35 +0.6 5,959,019 - AO353_27240 0.35 -0.2 5,959,043 - AO353_27240 0.38 -1.1 5,959,081 + AO353_27240 0.42 -1.1 5,959,081 + AO353_27240 0.42 +0.2 5,959,081 + AO353_27240 0.42 -0.9 5,959,081 + AO353_27240 0.42 -1.0 5,959,081 + AO353_27240 0.42 -0.6 5,959,081 + AO353_27240 0.42 +0.2 5,959,081 + AO353_27240 0.42 +0.3 5,959,081 + AO353_27240 0.42 -0.9 5,959,082 - AO353_27240 0.43 -0.1 5,959,082 - AO353_27240 0.43 -0.4 5,959,082 - AO353_27240 0.43 +1.1 5,959,082 - AO353_27240 0.43 +0.6 5,959,214 - AO353_27240 0.59 +1.1 5,959,420 + AO353_27240 0.85 -2.9 5,959,420 + AO353_27240 0.85 -0.6 5,959,420 + AO353_27240 0.85 +0.7 5,959,420 + AO353_27240 0.85 -0.1 5,959,421 - AO353_27240 0.85 -0.5 5,959,421 - AO353_27240 0.85 +0.3 5,959,453 + AO353_27240 0.89 -0.4 5,959,453 + AO353_27240 0.89 -0.0 5,959,453 + AO353_27240 0.89 -0.7 5,959,453 + AO353_27240 0.89 -0.7 5,959,453 + AO353_27240 0.89 +0.0 5,959,454 - AO353_27240 0.89 -1.0 5,959,454 - AO353_27240 0.89 -0.3 5,959,532 + +0.3 5,959,532 + -0.5 5,959,532 + +0.6 5,959,532 + +0.3 5,959,532 + +0.7 5,959,532 + +0.2 5,959,533 - -0.3 5,959,533 - +1.1 5,959,533 - +0.5 5,959,538 + +0.3 5,959,538 + +1.3 5,959,538 + -1.0 5,959,538 + +0.5 5,959,538 + +0.3 5,959,538 + -0.5 5,959,538 + -2.3 5,959,538 + +2.3 5,959,539 - +0.5 5,959,539 - +0.5 5,959,559 + -0.8 5,959,717 + -0.2 5,959,717 + -1.0 5,959,717 + -1.3 5,959,718 - +0.4 5,959,718 - -1.2 5,959,894 - AO353_27245 0.38 -0.6 5,959,975 + AO353_27245 0.52 -1.0 5,959,975 + AO353_27245 0.52 -1.9 5,959,975 + AO353_27245 0.52 +0.7 5,959,975 + AO353_27245 0.52 -1.1 5,959,976 - AO353_27245 0.53 +0.2 5,959,976 - AO353_27245 0.53 -0.7 5,959,998 + AO353_27245 0.57 +0.3 5,960,109 + AO353_27245 0.77 +0.2 5,960,109 + AO353_27245 0.77 +0.7 5,960,109 + AO353_27245 0.77 -0.5 5,960,110 - AO353_27245 0.77 -1.4 5,960,110 - AO353_27245 0.77 -1.0 5,960,110 - AO353_27245 0.77 +0.4 5,960,234 + +0.1 5,960,234 + -0.4 5,960,234 + +1.0 5,960,234 + +0.9 5,960,234 + +0.2 5,960,234 + -0.6 5,960,234 + +0.9 5,960,234 + +1.2 5,960,234 + -0.3 5,960,234 + +1.1 5,960,234 + -1.0 5,960,234 + +1.9 5,960,234 + +0.7 5,960,234 + +0.2 5,960,235 - -1.7 5,960,235 - +0.9 5,960,235 - -0.5 5,960,235 - -1.3 5,960,235 - -1.3 5,960,235 - +0.5 5,960,235 - +0.9 5,960,235 - +0.3 5,960,235 - -0.2 5,960,364 + AO353_27250 0.22 +1.7
Or see this region's nucleotide sequence