Experiment: benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13150 and AO353_13155 are separated by 96 nucleotides AO353_13155 and AO353_13160 overlap by 1 nucleotides
AO353_13150: AO353_13150 - GTPase HflX, at 2,913,861 to 2,915,162
_13150
AO353_13155: AO353_13155 - hypothetical protein, at 2,915,259 to 2,916,425
_13155
AO353_13160: AO353_13160 - membrane protease HflC, at 2,916,425 to 2,917,294
_13160
Position (kb)
2915
2916
2917 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2914.262 kb on + strand, within AO353_13150 at 2914.476 kb on + strand, within AO353_13150 at 2914.476 kb on + strand, within AO353_13150 at 2914.477 kb on - strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.479 kb on - strand, within AO353_13150 at 2914.479 kb on - strand, within AO353_13150 at 2914.607 kb on - strand, within AO353_13150 at 2914.670 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.810 kb on - strand, within AO353_13150 at 2914.810 kb on - strand, within AO353_13150 at 2914.810 kb on - strand, within AO353_13150 at 2914.811 kb on + strand, within AO353_13150 at 2914.812 kb on - strand, within AO353_13150 at 2914.812 kb on - strand, within AO353_13150 at 2914.812 kb on - strand, within AO353_13150 at 2915.160 kb on + strand at 2915.160 kb on + strand at 2915.204 kb on + strand at 2915.204 kb on + strand at 2915.204 kb on + strand at 2915.204 kb on + strand at 2915.204 kb on + strand at 2915.292 kb on - strand at 2915.312 kb on + strand at 2915.502 kb on + strand, within AO353_13155 at 2915.514 kb on + strand, within AO353_13155 at 2915.562 kb on + strand, within AO353_13155 at 2915.595 kb on + strand, within AO353_13155 at 2915.595 kb on + strand, within AO353_13155 at 2915.595 kb on + strand, within AO353_13155 at 2915.596 kb on - strand, within AO353_13155 at 2915.619 kb on + strand, within AO353_13155 at 2915.650 kb on - strand, within AO353_13155 at 2915.716 kb on - strand, within AO353_13155 at 2916.202 kb on - strand, within AO353_13155 at 2916.233 kb on + strand, within AO353_13155 at 2916.234 kb on - strand, within AO353_13155 at 2916.286 kb on - strand, within AO353_13155 at 2916.408 kb on - strand at 2916.408 kb on - strand at 2916.433 kb on + strand at 2916.433 kb on + strand at 2916.434 kb on - strand at 2916.451 kb on + strand at 2916.495 kb on - strand at 2916.587 kb on + strand, within AO353_13160 at 2916.588 kb on - strand, within AO353_13160 at 2916.690 kb on - strand, within AO353_13160 at 2916.690 kb on - strand, within AO353_13160 at 2917.092 kb on - strand, within AO353_13160 at 2917.178 kb on + strand, within AO353_13160 at 2917.188 kb on - strand, within AO353_13160 at 2917.188 kb on - strand, within AO353_13160 at 2917.369 kb on + strand at 2917.369 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction benzoic 0.58 mg/ml remove 2,914,262 + AO353_13150 0.31 -0.9 2,914,476 + AO353_13150 0.47 +1.5 2,914,476 + AO353_13150 0.47 +0.8 2,914,477 - AO353_13150 0.47 +1.0 2,914,478 + AO353_13150 0.47 +0.4 2,914,478 + AO353_13150 0.47 +0.2 2,914,478 + AO353_13150 0.47 -0.0 2,914,478 + AO353_13150 0.47 +1.2 2,914,478 + AO353_13150 0.47 +0.1 2,914,479 - AO353_13150 0.47 -0.7 2,914,479 - AO353_13150 0.47 +2.0 2,914,607 - AO353_13150 0.57 +1.1 2,914,670 + AO353_13150 0.62 -0.7 2,914,809 + AO353_13150 0.73 +0.9 2,914,809 + AO353_13150 0.73 +2.0 2,914,809 + AO353_13150 0.73 -0.9 2,914,809 + AO353_13150 0.73 -1.3 2,914,809 + AO353_13150 0.73 -0.1 2,914,809 + AO353_13150 0.73 +0.0 2,914,810 - AO353_13150 0.73 -2.0 2,914,810 - AO353_13150 0.73 +0.0 2,914,810 - AO353_13150 0.73 -1.6 2,914,811 + AO353_13150 0.73 +0.8 2,914,812 - AO353_13150 0.73 -0.4 2,914,812 - AO353_13150 0.73 -0.6 2,914,812 - AO353_13150 0.73 +1.0 2,915,160 + +0.9 2,915,160 + -0.5 2,915,204 + -0.6 2,915,204 + +1.8 2,915,204 + +0.3 2,915,204 + -0.8 2,915,204 + +0.4 2,915,292 - -1.6 2,915,312 + -1.3 2,915,502 + AO353_13155 0.21 -1.1 2,915,514 + AO353_13155 0.22 -1.4 2,915,562 + AO353_13155 0.26 -1.3 2,915,595 + AO353_13155 0.29 -1.4 2,915,595 + AO353_13155 0.29 -1.3 2,915,595 + AO353_13155 0.29 -0.9 2,915,596 - AO353_13155 0.29 +1.0 2,915,619 + AO353_13155 0.31 -0.8 2,915,650 - AO353_13155 0.34 +0.0 2,915,716 - AO353_13155 0.39 +0.6 2,916,202 - AO353_13155 0.81 +0.0 2,916,233 + AO353_13155 0.83 +0.5 2,916,234 - AO353_13155 0.84 +0.2 2,916,286 - AO353_13155 0.88 +1.3 2,916,408 - -0.6 2,916,408 - +1.0 2,916,433 + +0.4 2,916,433 + -1.1 2,916,434 - +2.0 2,916,451 + +0.2 2,916,495 - -1.3 2,916,587 + AO353_13160 0.19 -0.3 2,916,588 - AO353_13160 0.19 -0.1 2,916,690 - AO353_13160 0.30 +1.4 2,916,690 - AO353_13160 0.30 -0.6 2,917,092 - AO353_13160 0.77 -2.2 2,917,178 + AO353_13160 0.87 +0.5 2,917,188 - AO353_13160 0.88 +0.6 2,917,188 - AO353_13160 0.88 -0.1 2,917,369 + -0.6 2,917,369 + +0.0
Or see this region's nucleotide sequence