Experiment: benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07735 and AO353_07740 are separated by 193 nucleotides AO353_07740 and AO353_07745 are separated by 86 nucleotides
AO353_07735: AO353_07735 - AraC family transcriptional regulator, at 1,703,877 to 1,704,827
_07735
AO353_07740: AO353_07740 - ABC transporter for Carnitine, substrate-binding component (from data) , at 1,705,021 to 1,705,965
_07740
AO353_07745: AO353_07745 - NADPH:quinone reductase, at 1,706,052 to 1,706,939
_07745
Position (kb)
1705
1706 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1704.043 kb on - strand, within AO353_07735 at 1704.052 kb on + strand, within AO353_07735 at 1704.052 kb on + strand, within AO353_07735 at 1704.052 kb on + strand, within AO353_07735 at 1704.053 kb on - strand, within AO353_07735 at 1704.053 kb on - strand, within AO353_07735 at 1704.183 kb on + strand, within AO353_07735 at 1704.183 kb on + strand, within AO353_07735 at 1704.183 kb on + strand, within AO353_07735 at 1704.183 kb on + strand, within AO353_07735 at 1704.184 kb on - strand, within AO353_07735 at 1704.184 kb on - strand, within AO353_07735 at 1704.184 kb on - strand, within AO353_07735 at 1704.184 kb on - strand, within AO353_07735 at 1704.184 kb on - strand, within AO353_07735 at 1704.345 kb on - strand, within AO353_07735 at 1704.422 kb on - strand, within AO353_07735 at 1704.422 kb on - strand, within AO353_07735 at 1704.722 kb on - strand, within AO353_07735 at 1704.722 kb on - strand, within AO353_07735 at 1704.722 kb on - strand, within AO353_07735 at 1704.722 kb on - strand, within AO353_07735 at 1704.722 kb on - strand, within AO353_07735 at 1704.811 kb on + strand at 1704.812 kb on - strand at 1704.866 kb on + strand at 1704.867 kb on - strand at 1704.867 kb on - strand at 1704.956 kb on + strand at 1704.956 kb on + strand at 1704.998 kb on - strand at 1705.196 kb on - strand, within AO353_07740 at 1705.390 kb on + strand, within AO353_07740 at 1705.390 kb on + strand, within AO353_07740 at 1705.390 kb on + strand, within AO353_07740 at 1705.390 kb on + strand, within AO353_07740 at 1705.391 kb on - strand, within AO353_07740 at 1705.462 kb on + strand, within AO353_07740 at 1705.463 kb on - strand, within AO353_07740 at 1705.463 kb on - strand, within AO353_07740 at 1705.463 kb on - strand, within AO353_07740 at 1705.666 kb on + strand, within AO353_07740 at 1705.666 kb on + strand, within AO353_07740 at 1705.666 kb on + strand, within AO353_07740 at 1705.666 kb on + strand, within AO353_07740 at 1705.666 kb on + strand, within AO353_07740 at 1705.667 kb on - strand, within AO353_07740 at 1705.667 kb on - strand, within AO353_07740 at 1705.741 kb on + strand, within AO353_07740 at 1705.741 kb on + strand, within AO353_07740 at 1705.741 kb on + strand, within AO353_07740 at 1705.741 kb on + strand, within AO353_07740 at 1705.741 kb on + strand, within AO353_07740 at 1705.963 kb on + strand at 1705.963 kb on + strand at 1705.964 kb on - strand at 1706.244 kb on + strand, within AO353_07745 at 1706.245 kb on - strand, within AO353_07745 at 1706.475 kb on + strand, within AO353_07745 at 1706.475 kb on + strand, within AO353_07745 at 1706.475 kb on + strand, within AO353_07745 at 1706.475 kb on + strand, within AO353_07745 at 1706.475 kb on + strand, within AO353_07745 at 1706.475 kb on + strand, within AO353_07745 at 1706.476 kb on - strand, within AO353_07745 at 1706.476 kb on - strand, within AO353_07745 at 1706.476 kb on - strand, within AO353_07745 at 1706.476 kb on - strand, within AO353_07745 at 1706.476 kb on - strand, within AO353_07745 at 1706.476 kb on - strand, within AO353_07745 at 1706.476 kb on - strand, within AO353_07745 at 1706.476 kb on - strand, within AO353_07745 at 1706.476 kb on - strand, within AO353_07745 at 1706.476 kb on - strand, within AO353_07745 at 1706.476 kb on - strand, within AO353_07745 at 1706.953 kb on + strand at 1706.953 kb on + strand at 1706.953 kb on + strand at 1706.953 kb on + strand at 1706.953 kb on + strand at 1706.953 kb on + strand at 1706.953 kb on + strand at 1706.954 kb on - strand at 1706.954 kb on - strand at 1706.954 kb on - strand at 1706.954 kb on - strand at 1706.954 kb on - strand at 1706.954 kb on - strand at 1706.954 kb on - strand at 1706.954 kb on - strand at 1706.954 kb on - strand at 1706.954 kb on - strand at 1706.962 kb on + strand at 1706.962 kb on + strand at 1706.962 kb on + strand at 1706.962 kb on + strand at 1706.963 kb on - strand at 1706.963 kb on - strand at 1706.963 kb on - strand at 1706.963 kb on - strand at 1706.963 kb on - strand at 1706.963 kb on - strand at 1706.963 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction benzoic 0.58 mg/ml remove 1,704,043 - AO353_07735 0.17 -0.9 1,704,052 + AO353_07735 0.18 +1.6 1,704,052 + AO353_07735 0.18 -0.2 1,704,052 + AO353_07735 0.18 +0.8 1,704,053 - AO353_07735 0.19 +0.0 1,704,053 - AO353_07735 0.19 -0.0 1,704,183 + AO353_07735 0.32 -1.3 1,704,183 + AO353_07735 0.32 +0.6 1,704,183 + AO353_07735 0.32 -0.8 1,704,183 + AO353_07735 0.32 -0.7 1,704,184 - AO353_07735 0.32 -0.8 1,704,184 - AO353_07735 0.32 +0.6 1,704,184 - AO353_07735 0.32 -1.0 1,704,184 - AO353_07735 0.32 -0.5 1,704,184 - AO353_07735 0.32 +1.1 1,704,345 - AO353_07735 0.49 +0.4 1,704,422 - AO353_07735 0.57 -1.3 1,704,422 - AO353_07735 0.57 -0.4 1,704,722 - AO353_07735 0.89 -0.8 1,704,722 - AO353_07735 0.89 +0.2 1,704,722 - AO353_07735 0.89 -0.1 1,704,722 - AO353_07735 0.89 -0.2 1,704,722 - AO353_07735 0.89 -1.0 1,704,811 + +0.5 1,704,812 - +1.0 1,704,866 + +2.0 1,704,867 - -0.6 1,704,867 - -1.5 1,704,956 + -1.4 1,704,956 + -0.5 1,704,998 - +0.4 1,705,196 - AO353_07740 0.19 +0.6 1,705,390 + AO353_07740 0.39 +1.0 1,705,390 + AO353_07740 0.39 -1.8 1,705,390 + AO353_07740 0.39 -0.5 1,705,390 + AO353_07740 0.39 -0.1 1,705,391 - AO353_07740 0.39 -2.0 1,705,462 + AO353_07740 0.47 -0.5 1,705,463 - AO353_07740 0.47 -0.2 1,705,463 - AO353_07740 0.47 -0.5 1,705,463 - AO353_07740 0.47 -1.4 1,705,666 + AO353_07740 0.68 -0.1 1,705,666 + AO353_07740 0.68 -0.0 1,705,666 + AO353_07740 0.68 +0.8 1,705,666 + AO353_07740 0.68 +0.1 1,705,666 + AO353_07740 0.68 -2.1 1,705,667 - AO353_07740 0.68 -0.3 1,705,667 - AO353_07740 0.68 -0.3 1,705,741 + AO353_07740 0.76 +0.4 1,705,741 + AO353_07740 0.76 -0.7 1,705,741 + AO353_07740 0.76 -1.4 1,705,741 + AO353_07740 0.76 -0.4 1,705,741 + AO353_07740 0.76 +0.4 1,705,963 + +0.2 1,705,963 + +0.6 1,705,964 - -1.2 1,706,244 + AO353_07745 0.22 +1.2 1,706,245 - AO353_07745 0.22 +0.7 1,706,475 + AO353_07745 0.48 -0.7 1,706,475 + AO353_07745 0.48 +0.5 1,706,475 + AO353_07745 0.48 +1.3 1,706,475 + AO353_07745 0.48 +0.5 1,706,475 + AO353_07745 0.48 -0.7 1,706,475 + AO353_07745 0.48 -0.3 1,706,476 - AO353_07745 0.48 +0.0 1,706,476 - AO353_07745 0.48 -0.1 1,706,476 - AO353_07745 0.48 -0.8 1,706,476 - AO353_07745 0.48 -0.9 1,706,476 - AO353_07745 0.48 +2.0 1,706,476 - AO353_07745 0.48 +1.5 1,706,476 - AO353_07745 0.48 -0.0 1,706,476 - AO353_07745 0.48 -0.5 1,706,476 - AO353_07745 0.48 -1.2 1,706,476 - AO353_07745 0.48 -0.3 1,706,476 - AO353_07745 0.48 -1.7 1,706,953 + -0.5 1,706,953 + -0.4 1,706,953 + -0.5 1,706,953 + -0.2 1,706,953 + -1.1 1,706,953 + +0.0 1,706,953 + +0.7 1,706,954 - +0.8 1,706,954 - -0.1 1,706,954 - +0.5 1,706,954 - +1.2 1,706,954 - -1.3 1,706,954 - -0.1 1,706,954 - +0.5 1,706,954 - -1.3 1,706,954 - +0.1 1,706,954 - -0.1 1,706,962 + -0.9 1,706,962 + +0.1 1,706,962 + -0.1 1,706,962 + +0.2 1,706,963 - +0.8 1,706,963 - -0.1 1,706,963 - +0.2 1,706,963 - +0.5 1,706,963 - -0.5 1,706,963 - -0.5 1,706,963 - +0.3
Or see this region's nucleotide sequence