Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS07935 and ABZR86_RS07940 are separated by 16 nucleotides ABZR86_RS07940 and ABZR86_RS07945 are separated by 168 nucleotides ABZR86_RS07945 and ABZR86_RS07950 are separated by 381 nucleotides
ABZR86_RS07935: ABZR86_RS07935 - 4'-phosphopantetheinyl transferase superfamily protein, at 1,761,922 to 1,762,608
_RS07935
ABZR86_RS07940: ABZR86_RS07940 - TetR/AcrR family transcriptional regulator, at 1,762,625 to 1,763,428
_RS07940
ABZR86_RS07945: ABZR86_RS07945 - hypothetical protein, at 1,763,597 to 1,764,511
_RS07945
ABZR86_RS07950: ABZR86_RS07950 - hypothetical protein, at 1,764,893 to 1,765,402
_RS07950
Position (kb)
1763
1764
1765 Strain fitness (log2 ratio)
-1
0
1 at 1763.062 kb on - strand, within ABZR86_RS07940 at 1763.148 kb on - strand, within ABZR86_RS07940 at 1763.284 kb on - strand, within ABZR86_RS07940 at 1763.466 kb on - strand at 1763.521 kb on + strand at 1763.521 kb on + strand at 1763.522 kb on - strand at 1763.599 kb on - strand at 1763.619 kb on + strand at 1763.620 kb on - strand at 1763.620 kb on - strand at 1763.762 kb on - strand, within ABZR86_RS07945 at 1763.762 kb on - strand, within ABZR86_RS07945 at 1763.854 kb on + strand, within ABZR86_RS07945 at 1763.855 kb on - strand, within ABZR86_RS07945 at 1763.967 kb on + strand, within ABZR86_RS07945 at 1763.967 kb on + strand, within ABZR86_RS07945 at 1763.968 kb on - strand, within ABZR86_RS07945 at 1763.968 kb on - strand, within ABZR86_RS07945 at 1763.968 kb on - strand, within ABZR86_RS07945 at 1763.968 kb on - strand, within ABZR86_RS07945 at 1763.974 kb on + strand, within ABZR86_RS07945 at 1764.249 kb on + strand, within ABZR86_RS07945 at 1764.511 kb on + strand at 1764.526 kb on + strand at 1764.596 kb on + strand at 1764.878 kb on + strand at 1764.878 kb on + strand at 1764.901 kb on - strand at 1764.994 kb on + strand, within ABZR86_RS07950 at 1765.109 kb on - strand, within ABZR86_RS07950 at 1765.232 kb on - strand, within ABZR86_RS07950 at 1765.436 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 7.5 vol% remove 1,763,062 - ABZR86_RS07940 0.54 -0.5 1,763,148 - ABZR86_RS07940 0.65 -0.2 1,763,284 - ABZR86_RS07940 0.82 -1.0 1,763,466 - -0.0 1,763,521 + -0.4 1,763,521 + +0.1 1,763,522 - +0.4 1,763,599 - -0.2 1,763,619 + -0.1 1,763,620 - -0.6 1,763,620 - +0.4 1,763,762 - ABZR86_RS07945 0.18 +0.0 1,763,762 - ABZR86_RS07945 0.18 -0.2 1,763,854 + ABZR86_RS07945 0.28 -0.0 1,763,855 - ABZR86_RS07945 0.28 -0.0 1,763,967 + ABZR86_RS07945 0.40 -0.0 1,763,967 + ABZR86_RS07945 0.40 +0.4 1,763,968 - ABZR86_RS07945 0.41 -0.4 1,763,968 - ABZR86_RS07945 0.41 -0.4 1,763,968 - ABZR86_RS07945 0.41 -0.2 1,763,968 - ABZR86_RS07945 0.41 -0.2 1,763,974 + ABZR86_RS07945 0.41 -0.0 1,764,249 + ABZR86_RS07945 0.71 -0.4 1,764,511 + +0.0 1,764,526 + +0.8 1,764,596 + +0.9 1,764,878 + +0.5 1,764,878 + +1.5 1,764,901 - -0.9 1,764,994 + ABZR86_RS07950 0.20 -0.5 1,765,109 - ABZR86_RS07950 0.42 -0.4 1,765,232 - ABZR86_RS07950 0.66 -0.2 1,765,436 - -0.5
Or see this region's nucleotide sequence