Experiment: MoYLS4 with Dimethyl Sulfoxide 5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2033 and DvMF_2034 are separated by 339 nucleotides DvMF_2034 and DvMF_2035 are separated by 555 nucleotides
DvMF_2033: DvMF_2033 - protein of unknown function DUF214 (RefSeq), at 2,519,369 to 2,520,271
_2033
DvMF_2034: DvMF_2034 - dihydroxy-acid dehydratase (RefSeq), at 2,520,611 to 2,522,278
_2034
DvMF_2035: DvMF_2035 - 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase (RefSeq), at 2,522,834 to 2,525,176
_2035
Position (kb)
2520
2521
2522
2523 Strain fitness (log2 ratio)
-2
-1
0
1 at 2519.615 kb on - strand, within DvMF_2033 at 2519.617 kb on - strand, within DvMF_2033 at 2519.643 kb on + strand, within DvMF_2033 at 2519.645 kb on - strand, within DvMF_2033 at 2519.777 kb on + strand, within DvMF_2033 at 2519.780 kb on - strand, within DvMF_2033 at 2519.834 kb on + strand, within DvMF_2033 at 2519.845 kb on + strand, within DvMF_2033 at 2519.887 kb on - strand, within DvMF_2033 at 2519.956 kb on - strand, within DvMF_2033 at 2519.965 kb on + strand, within DvMF_2033 at 2520.085 kb on - strand, within DvMF_2033 at 2520.186 kb on - strand at 2520.197 kb on - strand at 2520.208 kb on + strand at 2520.513 kb on - strand at 2520.551 kb on + strand at 2520.672 kb on + strand at 2520.680 kb on - strand at 2520.765 kb on + strand at 2520.765 kb on + strand at 2520.773 kb on - strand at 2520.791 kb on - strand, within DvMF_2034 at 2521.233 kb on + strand, within DvMF_2034 at 2521.233 kb on + strand, within DvMF_2034 at 2521.304 kb on + strand, within DvMF_2034 at 2521.304 kb on + strand, within DvMF_2034 at 2521.350 kb on + strand, within DvMF_2034 at 2521.421 kb on + strand, within DvMF_2034 at 2521.429 kb on - strand, within DvMF_2034 at 2521.500 kb on + strand, within DvMF_2034 at 2521.500 kb on + strand, within DvMF_2034 at 2521.500 kb on + strand, within DvMF_2034 at 2521.508 kb on - strand, within DvMF_2034 at 2521.508 kb on - strand, within DvMF_2034 at 2521.508 kb on - strand, within DvMF_2034 at 2521.523 kb on - strand, within DvMF_2034 at 2521.741 kb on + strand, within DvMF_2034 at 2522.092 kb on - strand, within DvMF_2034 at 2522.097 kb on - strand, within DvMF_2034 at 2522.336 kb on - strand at 2522.631 kb on + strand at 2522.638 kb on + strand at 2522.638 kb on + strand at 2522.638 kb on + strand at 2522.638 kb on + strand at 2522.646 kb on - strand at 2522.646 kb on - strand at 2522.646 kb on - strand at 2522.646 kb on - strand at 2522.731 kb on - strand at 2522.733 kb on + strand at 2522.733 kb on + strand at 2522.741 kb on - strand at 2522.741 kb on - strand at 2522.741 kb on - strand at 2522.741 kb on - strand at 2522.809 kb on + strand at 2522.820 kb on + strand at 2522.835 kb on + strand at 2523.023 kb on + strand at 2523.037 kb on + strand at 2523.123 kb on - strand, within DvMF_2035
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Dimethyl Sulfoxide 5 % remove 2,519,615 - DvMF_2033 0.27 -0.1 2,519,617 - DvMF_2033 0.27 -0.1 2,519,643 + DvMF_2033 0.30 -0.2 2,519,645 - DvMF_2033 0.31 -0.2 2,519,777 + DvMF_2033 0.45 -0.0 2,519,780 - DvMF_2033 0.46 +0.6 2,519,834 + DvMF_2033 0.51 -0.3 2,519,845 + DvMF_2033 0.53 -0.2 2,519,887 - DvMF_2033 0.57 -0.2 2,519,956 - DvMF_2033 0.65 -0.1 2,519,965 + DvMF_2033 0.66 -0.3 2,520,085 - DvMF_2033 0.79 -0.2 2,520,186 - -0.0 2,520,197 - -0.2 2,520,208 + -0.1 2,520,513 - -0.5 2,520,551 + -0.2 2,520,672 + -1.5 2,520,680 - -1.9 2,520,765 + -1.9 2,520,765 + -1.4 2,520,773 - -2.3 2,520,791 - DvMF_2034 0.11 -1.8 2,521,233 + DvMF_2034 0.37 -1.9 2,521,233 + DvMF_2034 0.37 -1.3 2,521,304 + DvMF_2034 0.42 -1.6 2,521,304 + DvMF_2034 0.42 -2.4 2,521,350 + DvMF_2034 0.44 -2.2 2,521,421 + DvMF_2034 0.49 -1.3 2,521,429 - DvMF_2034 0.49 -1.8 2,521,500 + DvMF_2034 0.53 -1.6 2,521,500 + DvMF_2034 0.53 -1.2 2,521,500 + DvMF_2034 0.53 -1.4 2,521,508 - DvMF_2034 0.54 -1.7 2,521,508 - DvMF_2034 0.54 -2.1 2,521,508 - DvMF_2034 0.54 -1.4 2,521,523 - DvMF_2034 0.55 -1.9 2,521,741 + DvMF_2034 0.68 -1.5 2,522,092 - DvMF_2034 0.89 -1.5 2,522,097 - DvMF_2034 0.89 -1.6 2,522,336 - +0.1 2,522,631 + -0.1 2,522,638 + -0.7 2,522,638 + -0.3 2,522,638 + -0.5 2,522,638 + +0.1 2,522,646 - +0.1 2,522,646 - -0.2 2,522,646 - -0.6 2,522,646 - -0.4 2,522,731 - +0.0 2,522,733 + -0.0 2,522,733 + -0.7 2,522,741 - -1.0 2,522,741 - -0.5 2,522,741 - -0.5 2,522,741 - -0.3 2,522,809 + -0.3 2,522,820 + -0.2 2,522,835 + -0.1 2,523,023 + -0.4 2,523,037 + -0.2 2,523,123 - DvMF_2035 0.12 -0.2
Or see this region's nucleotide sequence