Experiment: MoYLS4 with Dimethyl Sulfoxide 5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1742 and DvMF_1743 overlap by 4 nucleotides DvMF_1743 and DvMF_1744 overlap by 8 nucleotides DvMF_1744 and DvMF_1745 are separated by 195 nucleotides DvMF_1745 and DvMF_1746 overlap by 20 nucleotides
DvMF_1742: DvMF_1742 - Phosphoribosylanthranilate isomerase (RefSeq), at 2,129,558 to 2,130,235
_1742
DvMF_1743: DvMF_1743 - Indole-3-glycerol-phosphate synthase (RefSeq), at 2,130,232 to 2,131,197
_1743
DvMF_1744: DvMF_1744 - anthranilate phosphoribosyltransferase (RefSeq), at 2,131,190 to 2,132,206
_1744
DvMF_1745: DvMF_1745 - glutamine amidotransferase of anthranilate synthase (RefSeq), at 2,132,402 to 2,132,980
_1745
DvMF_1746: DvMF_1746 - Anthranilate synthase (RefSeq), at 2,132,961 to 2,134,523
_1746
Position (kb)
2131
2132
2133 Strain fitness (log2 ratio)
-2
-1
0
1 at 2130.405 kb on - strand, within DvMF_1743 at 2130.452 kb on - strand, within DvMF_1743 at 2130.675 kb on + strand, within DvMF_1743 at 2130.840 kb on + strand, within DvMF_1743 at 2130.892 kb on + strand, within DvMF_1743 at 2130.909 kb on + strand, within DvMF_1743 at 2131.049 kb on + strand, within DvMF_1743 at 2131.261 kb on + strand at 2131.283 kb on + strand at 2131.283 kb on + strand at 2131.291 kb on - strand at 2131.338 kb on + strand, within DvMF_1744 at 2131.496 kb on - strand, within DvMF_1744 at 2131.611 kb on - strand, within DvMF_1744 at 2131.828 kb on - strand, within DvMF_1744 at 2131.897 kb on - strand, within DvMF_1744 at 2132.406 kb on - strand at 2132.406 kb on - strand at 2132.472 kb on + strand, within DvMF_1745 at 2132.505 kb on + strand, within DvMF_1745 at 2132.505 kb on + strand, within DvMF_1745 at 2132.513 kb on - strand, within DvMF_1745 at 2132.513 kb on - strand, within DvMF_1745 at 2132.697 kb on - strand, within DvMF_1745 at 2132.740 kb on + strand, within DvMF_1745 at 2132.746 kb on + strand, within DvMF_1745 at 2132.754 kb on - strand, within DvMF_1745 at 2132.821 kb on + strand, within DvMF_1745 at 2133.156 kb on + strand, within DvMF_1746 at 2133.198 kb on + strand, within DvMF_1746
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Dimethyl Sulfoxide 5 % remove 2,130,405 - DvMF_1743 0.18 -0.6 2,130,452 - DvMF_1743 0.23 -0.4 2,130,675 + DvMF_1743 0.46 -1.3 2,130,840 + DvMF_1743 0.63 -1.1 2,130,892 + DvMF_1743 0.68 -2.1 2,130,909 + DvMF_1743 0.70 -0.6 2,131,049 + DvMF_1743 0.85 -1.3 2,131,261 + -1.8 2,131,283 + -1.7 2,131,283 + -1.6 2,131,291 - -1.3 2,131,338 + DvMF_1744 0.15 -1.5 2,131,496 - DvMF_1744 0.30 -1.1 2,131,611 - DvMF_1744 0.41 -1.5 2,131,828 - DvMF_1744 0.63 -1.2 2,131,897 - DvMF_1744 0.70 -1.2 2,132,406 - -0.1 2,132,406 - -0.4 2,132,472 + DvMF_1745 0.12 -0.9 2,132,505 + DvMF_1745 0.18 -0.4 2,132,505 + DvMF_1745 0.18 -0.7 2,132,513 - DvMF_1745 0.19 -0.2 2,132,513 - DvMF_1745 0.19 -0.4 2,132,697 - DvMF_1745 0.51 -1.2 2,132,740 + DvMF_1745 0.58 -0.3 2,132,746 + DvMF_1745 0.59 +0.5 2,132,754 - DvMF_1745 0.61 -0.8 2,132,821 + DvMF_1745 0.72 -0.4 2,133,156 + DvMF_1746 0.12 -0.9 2,133,198 + DvMF_1746 0.15 -0.8
Or see this region's nucleotide sequence