Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1404
Experiment: MoYLS4 with Dimethyl Sulfoxide 5 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Dimethyl Sulfoxide 5 % |
|---|---|---|---|---|---|
| remove | |||||
| 1,714,544 | + | DvMF_1403 | 0.48 | -0.9 | |
| 1,714,549 | + | DvMF_1403 | 0.48 | -1.5 | |
| 1,714,652 | + | DvMF_1403 | 0.55 | -1.1 | |
| 1,714,972 | - | DvMF_1403 | 0.77 | -1.9 | |
| 1,715,009 | + | DvMF_1403 | 0.80 | -0.7 | |
| 1,715,176 | + | -1.3 | |||
| 1,715,176 | + | -2.3 | |||
| 1,715,200 | + | -1.0 | |||
| 1,715,344 | + | -0.9 | |||
| 1,715,625 | - | -1.5 | |||
| 1,715,625 | - | -2.6 | |||
| 1,715,688 | - | -1.7 | |||
| 1,715,814 | + | DvMF_1404 | 0.12 | -1.4 | |
| 1,716,509 | + | DvMF_1404 | 0.44 | -2.6 | |
| 1,716,522 | - | DvMF_1404 | 0.45 | -1.7 | |
| 1,716,748 | + | DvMF_1404 | 0.55 | -1.3 | |
| 1,716,929 | + | DvMF_1404 | 0.63 | -1.5 | |
| 1,716,980 | + | DvMF_1404 | 0.66 | -3.2 | |
| 1,717,564 | - | -1.3 | |||
| 1,717,623 | - | -0.9 | |||
| 1,717,653 | - | -1.1 | |||
| 1,717,747 | + | -0.1 | |||
| 1,717,748 | + | -0.1 | |||
| 1,718,426 | - | DvMF_1405 | 0.15 | -0.9 | |
| 1,718,642 | + | DvMF_1405 | 0.61 | +0.1 | |
| 1,718,709 | - | DvMF_1405 | 0.75 | -0.5 |
Or see this region's nucleotide sequence