Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1398
Experiment: MoYLS4 with Dimethyl Sulfoxide 5 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Dimethyl Sulfoxide 5 % |
|---|---|---|---|---|---|
| remove | |||||
| 1,703,847 | - | +0.0 | |||
| 1,703,930 | + | -0.1 | |||
| 1,704,111 | + | -0.2 | |||
| 1,704,119 | - | -0.3 | |||
| 1,704,360 | + | DvMF_1397 | 0.56 | -0.3 | |
| 1,704,368 | + | DvMF_1397 | 0.58 | -0.2 | |
| 1,704,400 | - | DvMF_1397 | 0.65 | -1.0 | |
| 1,704,400 | - | DvMF_1397 | 0.65 | -0.1 | |
| 1,704,574 | + | -0.6 | |||
| 1,704,939 | + | -0.2 | |||
| 1,704,956 | - | -0.0 | |||
| 1,705,066 | + | DvMF_1398 | 0.12 | -0.2 | |
| 1,705,431 | + | DvMF_1398 | 0.29 | +0.2 | |
| 1,705,578 | - | DvMF_1398 | 0.36 | -1.1 | |
| 1,705,580 | + | DvMF_1398 | 0.36 | -0.9 | |
| 1,705,857 | - | DvMF_1398 | 0.50 | -2.3 | |
| 1,706,209 | + | DvMF_1398 | 0.67 | -0.9 | |
| 1,706,256 | + | DvMF_1398 | 0.69 | -1.1 | |
| 1,706,380 | - | DvMF_1398 | 0.75 | -0.5 | |
| 1,706,801 | - | -0.4 | |||
| 1,706,986 | + | -0.4 | |||
| 1,707,392 | + | -0.1 | |||
| 1,707,447 | + | -0.3 | |||
| 1,707,457 | + | -0.0 | |||
| 1,707,596 | + | -0.3 | |||
| 1,707,740 | - | DvMF_1399 | 0.13 | -0.2 |
Or see this region's nucleotide sequence