Experiment: MoYLS4 with Dimethyl Sulfoxide 5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1338 and DvMF_1339 are separated by 186 nucleotides DvMF_1339 and DvMF_1340 are separated by 181 nucleotides DvMF_1340 and DvMF_1341 are separated by 141 nucleotides
DvMF_1338: DvMF_1338 - metal dependent phosphohydrolase (RefSeq), at 1,632,955 to 1,634,310
_1338
DvMF_1339: DvMF_1339 - molybdenum cofactor synthesis domain protein (RefSeq), at 1,634,497 to 1,635,312
_1339
DvMF_1340: DvMF_1340 - hypothetical protein (RefSeq), at 1,635,494 to 1,635,907
_1340
DvMF_1341: DvMF_1341 - Lysine exporter protein (LYSE/YGGA) (RefSeq), at 1,636,049 to 1,636,786
_1341
Position (kb)
1634
1635
1636 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1633.547 kb on + strand, within DvMF_1338 at 1633.548 kb on - strand, within DvMF_1338 at 1633.628 kb on + strand, within DvMF_1338 at 1633.827 kb on - strand, within DvMF_1338 at 1634.073 kb on + strand, within DvMF_1338 at 1634.180 kb on - strand at 1634.608 kb on + strand, within DvMF_1339 at 1635.161 kb on - strand, within DvMF_1339 at 1635.195 kb on - strand, within DvMF_1339 at 1635.422 kb on + strand at 1635.595 kb on + strand, within DvMF_1340 at 1635.676 kb on + strand, within DvMF_1340 at 1635.684 kb on - strand, within DvMF_1340 at 1636.017 kb on + strand at 1636.119 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Dimethyl Sulfoxide 5 % remove 1,633,547 + DvMF_1338 0.44 -0.4 1,633,548 - DvMF_1338 0.44 -0.2 1,633,628 + DvMF_1338 0.50 -0.2 1,633,827 - DvMF_1338 0.64 -0.9 1,634,073 + DvMF_1338 0.82 -0.4 1,634,180 - -0.2 1,634,608 + DvMF_1339 0.14 -2.2 1,635,161 - DvMF_1339 0.81 -3.4 1,635,195 - DvMF_1339 0.86 -2.0 1,635,422 + -0.6 1,635,595 + DvMF_1340 0.24 -0.5 1,635,676 + DvMF_1340 0.44 -0.5 1,635,684 - DvMF_1340 0.46 -0.6 1,636,017 + -0.1 1,636,119 - -0.4
Or see this region's nucleotide sequence