Experiment: MoYLS4 with Dimethyl Sulfoxide 5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1294 and DvMF_1295 are separated by 883 nucleotides DvMF_1295 and DvMF_1296 are separated by 178 nucleotides DvMF_1296 and DvMF_1297 are separated by 47 nucleotides DvMF_1297 and DvMF_1298 are separated by 57 nucleotides
DvMF_1294: DvMF_1294 - hypothetical protein (RefSeq), at 1,583,890 to 1,584,360
_1294
DvMF_1295: DvMF_1295 - hypothetical protein (RefSeq), at 1,585,244 to 1,586,284
_1295
DvMF_1296: DvMF_1296 - hypothetical protein (RefSeq), at 1,586,463 to 1,586,819
_1296
DvMF_1297: DvMF_1297 - hypothetical protein (RefSeq), at 1,586,867 to 1,587,004
_1297
DvMF_1298: DvMF_1298 - phage tail tape measure protein, TP901 family (RefSeq), at 1,587,062 to 1,589,407
_1298
Position (kb)
1585
1586
1587 Strain fitness (log2 ratio)
-1
0
1 at 1585.764 kb on + strand, within DvMF_1295 at 1586.474 kb on + strand at 1586.482 kb on - strand at 1586.561 kb on + strand, within DvMF_1296 at 1586.569 kb on - strand, within DvMF_1296 at 1586.569 kb on - strand, within DvMF_1296 at 1586.600 kb on + strand, within DvMF_1296 at 1586.668 kb on + strand, within DvMF_1296 at 1586.726 kb on + strand, within DvMF_1296 at 1586.783 kb on + strand, within DvMF_1296 at 1586.783 kb on + strand, within DvMF_1296 at 1586.791 kb on - strand at 1586.857 kb on + strand at 1586.968 kb on - strand, within DvMF_1297 at 1587.146 kb on - strand at 1587.242 kb on + strand at 1587.255 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Dimethyl Sulfoxide 5 % remove 1,585,764 + DvMF_1295 0.50 -0.9 1,586,474 + -0.1 1,586,482 - -0.0 1,586,561 + DvMF_1296 0.27 -0.3 1,586,569 - DvMF_1296 0.30 -0.2 1,586,569 - DvMF_1296 0.30 -0.1 1,586,600 + DvMF_1296 0.38 +0.2 1,586,668 + DvMF_1296 0.57 -0.2 1,586,726 + DvMF_1296 0.74 -0.5 1,586,783 + DvMF_1296 0.90 -0.1 1,586,783 + DvMF_1296 0.90 +0.1 1,586,791 - -0.6 1,586,857 + -1.0 1,586,968 - DvMF_1297 0.73 -0.3 1,587,146 - -0.4 1,587,242 + -0.6 1,587,255 - -0.5
Or see this region's nucleotide sequence