Experiment: MoYLS4 with Dimethyl Sulfoxide 5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1159 and DvMF_1160 are separated by 165 nucleotides
DvMF_1159: DvMF_1159 - type I secretion membrane fusion protein, HlyD family (RefSeq), at 1,424,039 to 1,425,439
_1159
DvMF_1160: DvMF_1160 - cyclic nucleotide-binding protein (RefSeq), at 1,425,605 to 1,427,809
_1160
Position (kb)
1425
1426
1427
1428 Strain fitness (log2 ratio)
-1
0
1 at 1424.701 kb on + strand, within DvMF_1159 at 1424.709 kb on - strand, within DvMF_1159 at 1424.709 kb on - strand, within DvMF_1159 at 1424.709 kb on - strand, within DvMF_1159 at 1424.768 kb on - strand, within DvMF_1159 at 1425.101 kb on + strand, within DvMF_1159 at 1425.166 kb on - strand, within DvMF_1159 at 1425.310 kb on - strand at 1425.401 kb on - strand at 1425.662 kb on - strand at 1425.937 kb on - strand, within DvMF_1160 at 1425.942 kb on + strand, within DvMF_1160 at 1425.989 kb on - strand, within DvMF_1160 at 1426.071 kb on + strand, within DvMF_1160 at 1426.172 kb on - strand, within DvMF_1160 at 1426.257 kb on - strand, within DvMF_1160 at 1426.571 kb on - strand, within DvMF_1160 at 1426.736 kb on + strand, within DvMF_1160 at 1426.761 kb on - strand, within DvMF_1160 at 1427.025 kb on + strand, within DvMF_1160 at 1427.169 kb on - strand, within DvMF_1160 at 1427.174 kb on + strand, within DvMF_1160 at 1427.287 kb on - strand, within DvMF_1160 at 1427.417 kb on - strand, within DvMF_1160 at 1427.447 kb on - strand, within DvMF_1160 at 1427.615 kb on - strand at 1427.674 kb on - strand at 1427.772 kb on + strand at 1427.850 kb on + strand at 1427.956 kb on + strand at 1428.033 kb on + strand at 1428.099 kb on - strand at 1428.127 kb on + strand at 1428.514 kb on - strand at 1428.617 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Dimethyl Sulfoxide 5 % remove 1,424,701 + DvMF_1159 0.47 -0.8 1,424,709 - DvMF_1159 0.48 -0.5 1,424,709 - DvMF_1159 0.48 -0.9 1,424,709 - DvMF_1159 0.48 -1.0 1,424,768 - DvMF_1159 0.52 -1.0 1,425,101 + DvMF_1159 0.76 -0.6 1,425,166 - DvMF_1159 0.80 -1.3 1,425,310 - -1.3 1,425,401 - -0.9 1,425,662 - -0.4 1,425,937 - DvMF_1160 0.15 -0.7 1,425,942 + DvMF_1160 0.15 -1.0 1,425,989 - DvMF_1160 0.17 -1.5 1,426,071 + DvMF_1160 0.21 -0.7 1,426,172 - DvMF_1160 0.26 -0.6 1,426,257 - DvMF_1160 0.30 -1.1 1,426,571 - DvMF_1160 0.44 -0.8 1,426,736 + DvMF_1160 0.51 -0.9 1,426,761 - DvMF_1160 0.52 -1.2 1,427,025 + DvMF_1160 0.64 -1.4 1,427,169 - DvMF_1160 0.71 -1.5 1,427,174 + DvMF_1160 0.71 -1.7 1,427,287 - DvMF_1160 0.76 -0.7 1,427,417 - DvMF_1160 0.82 -1.0 1,427,447 - DvMF_1160 0.84 -0.8 1,427,615 - -0.0 1,427,674 - -0.9 1,427,772 + -0.8 1,427,850 + -0.8 1,427,956 + -1.0 1,428,033 + -0.4 1,428,099 - -1.2 1,428,127 + -0.4 1,428,514 - -0.7 1,428,617 - -1.4
Or see this region's nucleotide sequence