Experiment: MoYLS4 with Dimethyl Sulfoxide 5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1156 and DvMF_1157 are separated by 169 nucleotides DvMF_1157 and DvMF_1158 are separated by 131 nucleotides
DvMF_1156: DvMF_1156 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 1,417,854 to 1,420,274
_1156
DvMF_1157: DvMF_1157 - putative PAS/PAC sensor protein (RefSeq), at 1,420,444 to 1,422,615
_1157
DvMF_1158: DvMF_1158 - transglutaminase family protein cysteine peptidase BTLCP (RefSeq), at 1,422,747 to 1,424,039
_1158
Position (kb)
1420
1421
1422
1423 Strain fitness (log2 ratio)
-2
-1
0
1 at 1419.457 kb on + strand, within DvMF_1156 at 1419.564 kb on + strand, within DvMF_1156 at 1419.591 kb on - strand, within DvMF_1156 at 1420.165 kb on - strand at 1420.359 kb on - strand at 1420.478 kb on + strand at 1420.880 kb on - strand, within DvMF_1157 at 1420.893 kb on + strand, within DvMF_1157 at 1421.037 kb on + strand, within DvMF_1157 at 1421.052 kb on - strand, within DvMF_1157 at 1421.073 kb on - strand, within DvMF_1157 at 1421.078 kb on + strand, within DvMF_1157 at 1421.286 kb on - strand, within DvMF_1157 at 1421.286 kb on - strand, within DvMF_1157 at 1421.467 kb on + strand, within DvMF_1157 at 1421.663 kb on + strand, within DvMF_1157 at 1421.758 kb on + strand, within DvMF_1157 at 1421.879 kb on + strand, within DvMF_1157 at 1421.948 kb on + strand, within DvMF_1157 at 1421.948 kb on + strand, within DvMF_1157 at 1421.967 kb on - strand, within DvMF_1157 at 1422.276 kb on + strand, within DvMF_1157 at 1422.284 kb on - strand, within DvMF_1157 at 1422.353 kb on + strand, within DvMF_1157 at 1422.366 kb on - strand, within DvMF_1157 at 1422.461 kb on + strand at 1422.613 kb on + strand at 1422.958 kb on - strand, within DvMF_1158 at 1423.188 kb on + strand, within DvMF_1158 at 1423.355 kb on - strand, within DvMF_1158 at 1423.601 kb on + strand, within DvMF_1158
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Dimethyl Sulfoxide 5 % remove 1,419,457 + DvMF_1156 0.66 -0.2 1,419,564 + DvMF_1156 0.71 -0.1 1,419,591 - DvMF_1156 0.72 -0.0 1,420,165 - -0.0 1,420,359 - -0.4 1,420,478 + -1.8 1,420,880 - DvMF_1157 0.20 -1.2 1,420,893 + DvMF_1157 0.21 -1.3 1,421,037 + DvMF_1157 0.27 -0.6 1,421,052 - DvMF_1157 0.28 -1.0 1,421,073 - DvMF_1157 0.29 -0.9 1,421,078 + DvMF_1157 0.29 -1.3 1,421,286 - DvMF_1157 0.39 -0.9 1,421,286 - DvMF_1157 0.39 -1.0 1,421,467 + DvMF_1157 0.47 -1.6 1,421,663 + DvMF_1157 0.56 -0.5 1,421,758 + DvMF_1157 0.60 -0.4 1,421,879 + DvMF_1157 0.66 -0.8 1,421,948 + DvMF_1157 0.69 -1.1 1,421,948 + DvMF_1157 0.69 -0.9 1,421,967 - DvMF_1157 0.70 -1.5 1,422,276 + DvMF_1157 0.84 -0.3 1,422,284 - DvMF_1157 0.85 -0.9 1,422,353 + DvMF_1157 0.88 -1.1 1,422,366 - DvMF_1157 0.88 -1.1 1,422,461 + -0.6 1,422,613 + -1.5 1,422,958 - DvMF_1158 0.16 -1.0 1,423,188 + DvMF_1158 0.34 -1.9 1,423,355 - DvMF_1158 0.47 -0.9 1,423,601 + DvMF_1158 0.66 -0.8
Or see this region's nucleotide sequence