Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0975

Experiment: MoYLS4 with Dimethyl Sulfoxide 5 %

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0974 and pgk are separated by 560 nucleotidespgk and DvMF_0976 are separated by 372 nucleotides DvMF_0974: DvMF_0974 - transcriptional regulator, MucR family (RefSeq), at 1,179,945 to 1,180,343 _0974 DvMF_0975: pgk - phosphoglycerate kinase (RefSeq), at 1,180,904 to 1,182,085 pgk DvMF_0976: DvMF_0976 - transketolase (RefSeq), at 1,182,458 to 1,184,452 _0976 Position (kb) 1180 1181 1182 1183Strain fitness (log2 ratio) -1 0 1at 1180.454 kb on - strandat 1182.094 kb on - strandat 1182.414 kb on + strandat 1182.414 kb on + strandat 1182.446 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Dimethyl Sulfoxide 5 %
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1,180,454 - -0.3
1,182,094 - -0.6
1,182,414 + -0.2
1,182,414 + -0.7
1,182,446 + -0.8

Or see this region's nucleotide sequence