Experiment: MoYLS4 with Dimethyl Sulfoxide 5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0471 and DvMF_0472 are separated by 9 nucleotides DvMF_0472 and DvMF_0473 are separated by 69 nucleotides DvMF_0473 and DvMF_0474 are separated by 168 nucleotides
DvMF_0471: DvMF_0471 - DNA repair protein RadA (RefSeq), at 553,249 to 554,727
_0471
DvMF_0472: DvMF_0472 - hypothetical protein (RefSeq), at 554,737 to 555,705
_0472
DvMF_0473: DvMF_0473 - hypoxanthine phosphoribosyltransferase (RefSeq), at 555,775 to 556,314
_0473
DvMF_0474: DvMF_0474 - acetyltransferase (RefSeq), at 556,483 to 556,950
_0474
Position (kb) 554
555
556 Strain fitness (log2 ratio) -2
-1
0
1 at 553.852 kb on - strand, within DvMF_0471 at 553.862 kb on - strand, within DvMF_0471 at 553.883 kb on + strand, within DvMF_0471 at 553.987 kb on - strand, within DvMF_0471 at 554.171 kb on + strand, within DvMF_0471 at 554.525 kb on - strand, within DvMF_0471 at 554.613 kb on - strand at 554.628 kb on + strand at 554.628 kb on + strand at 554.628 kb on + strand at 554.636 kb on - strand at 554.827 kb on - strand at 554.847 kb on - strand, within DvMF_0472 at 555.112 kb on + strand, within DvMF_0472 at 555.227 kb on - strand, within DvMF_0472 at 555.255 kb on + strand, within DvMF_0472 at 555.315 kb on - strand, within DvMF_0472 at 555.464 kb on + strand, within DvMF_0472 at 555.619 kb on - strand at 555.619 kb on - strand at 555.631 kb on - strand at 555.666 kb on + strand at 555.847 kb on + strand, within DvMF_0473 at 556.066 kb on - strand, within DvMF_0473 at 556.141 kb on + strand, within DvMF_0473 at 556.201 kb on + strand, within DvMF_0473 at 556.276 kb on - strand at 556.524 kb on + strand at 556.659 kb on - strand, within DvMF_0474
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Dimethyl Sulfoxide 5 % remove 553,852 - DvMF_0471 0.41 -0.3 553,862 - DvMF_0471 0.41 -0.2 553,883 + DvMF_0471 0.43 -0.2 553,987 - DvMF_0471 0.50 +0.6 554,171 + DvMF_0471 0.62 -0.8 554,525 - DvMF_0471 0.86 -0.1 554,613 - -0.2 554,628 + -0.6 554,628 + -0.3 554,628 + -0.4 554,636 - -0.0 554,827 - -0.3 554,847 - DvMF_0472 0.11 -1.0 555,112 + DvMF_0472 0.39 -0.8 555,227 - DvMF_0472 0.51 -0.8 555,255 + DvMF_0472 0.53 -0.8 555,315 - DvMF_0472 0.60 -1.6 555,464 + DvMF_0472 0.75 -2.3 555,619 - -1.0 555,619 - -0.6 555,631 - -0.3 555,666 + -1.2 555,847 + DvMF_0473 0.13 -0.1 556,066 - DvMF_0473 0.54 -0.4 556,141 + DvMF_0473 0.68 -0.0 556,201 + DvMF_0473 0.79 +0.1 556,276 - -0.2 556,524 + -0.9 556,659 - DvMF_0474 0.38 -0.2
Or see this region's nucleotide sequence