Experiment: MoYLS4 with Dimethyl Sulfoxide 5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0458 and DvMF_0459 are separated by 1 nucleotides DvMF_0459 and DvMF_0460 are separated by 477 nucleotides DvMF_0460 and DvMF_0461 are separated by 122 nucleotides DvMF_0461 and DvMF_0462 are separated by 110 nucleotides
DvMF_0458: DvMF_0458 - ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq), at 536,831 to 539,281
_0458
DvMF_0459: DvMF_0459 - ATP-dependent Clp protease adaptor protein ClpS (RefSeq), at 539,283 to 539,585
_0459
DvMF_0460: DvMF_0460 - adenylate cyclase (RefSeq), at 540,063 to 540,740
_0460
DvMF_0461: DvMF_0461 - Camphor resistance CrcB protein (RefSeq), at 540,863 to 541,237
_0461
DvMF_0462: DvMF_0462 - protein of unknown function DUF190 (RefSeq), at 541,348 to 541,743
_0462
Position (kb) 540
541 Strain fitness (log2 ratio) -1
0
1 at 539.281 kb on + strand at 539.281 kb on + strand at 539.291 kb on + strand at 539.366 kb on + strand, within DvMF_0459 at 539.379 kb on - strand, within DvMF_0459 at 539.885 kb on + strand at 539.900 kb on - strand at 539.920 kb on + strand at 540.080 kb on + strand at 540.234 kb on + strand, within DvMF_0460 at 540.324 kb on + strand, within DvMF_0460 at 540.637 kb on + strand, within DvMF_0460 at 540.901 kb on + strand, within DvMF_0461 at 541.173 kb on - strand, within DvMF_0461 at 541.253 kb on + strand at 541.281 kb on - strand at 541.370 kb on + strand at 541.641 kb on - strand, within DvMF_0462 at 541.738 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Dimethyl Sulfoxide 5 % remove 539,281 + -0.1 539,281 + -0.3 539,291 + -0.1 539,366 + DvMF_0459 0.27 +0.1 539,379 - DvMF_0459 0.32 -0.4 539,885 + -0.4 539,900 - -0.2 539,920 + +0.1 540,080 + -0.2 540,234 + DvMF_0460 0.25 -0.7 540,324 + DvMF_0460 0.38 -1.2 540,637 + DvMF_0460 0.85 -0.9 540,901 + DvMF_0461 0.10 +0.0 541,173 - DvMF_0461 0.83 -0.6 541,253 + -0.1 541,281 - -0.3 541,370 + -0.2 541,641 - DvMF_0462 0.74 -0.7 541,738 + -0.2
Or see this region's nucleotide sequence