Experiment: MoYLS4 with Dimethyl Sulfoxide 5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0405 and DvMF_0406 are separated by 141 nucleotides DvMF_0406 and DvMF_0407 overlap by 17 nucleotides DvMF_0407 and DvMF_0408 are separated by 5 nucleotides DvMF_0408 and DvMF_0409 are separated by 36 nucleotides
DvMF_0405: DvMF_0405 - hypothetical protein (RefSeq), at 475,875 to 476,840
_0405
DvMF_0406: DvMF_0406 - Tetratricopeptide TPR_4 (RefSeq), at 476,982 to 477,947
_0406
DvMF_0407: DvMF_0407 - Septum formation initiator (RefSeq), at 477,931 to 478,260
_0407
DvMF_0408: DvMF_0408 - hypothetical protein (RefSeq), at 478,266 to 478,538
_0408
DvMF_0409: DvMF_0409 - CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (RefSeq), at 478,575 to 479,162
_0409
Position (kb) 476
477
478 Strain fitness (log2 ratio) -2
-1
0
1 at 476.013 kb on - strand, within DvMF_0405 at 476.171 kb on - strand, within DvMF_0405 at 476.394 kb on + strand, within DvMF_0405 at 476.671 kb on - strand, within DvMF_0405 at 476.759 kb on - strand at 476.844 kb on + strand at 476.988 kb on - strand at 477.550 kb on - strand, within DvMF_0406 at 477.568 kb on + strand, within DvMF_0406 at 477.576 kb on - strand, within DvMF_0406 at 478.398 kb on - strand, within DvMF_0408 at 478.512 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Dimethyl Sulfoxide 5 % remove 476,013 - DvMF_0405 0.14 +0.5 476,171 - DvMF_0405 0.31 +0.1 476,394 + DvMF_0405 0.54 +0.0 476,671 - DvMF_0405 0.82 +0.2 476,759 - +0.5 476,844 + -1.8 476,988 - -0.8 477,550 - DvMF_0406 0.59 -1.0 477,568 + DvMF_0406 0.61 -2.0 477,576 - DvMF_0406 0.61 -0.8 478,398 - DvMF_0408 0.48 -1.3 478,512 + -0.7
Or see this region's nucleotide sequence