Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5371

Experiment: Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0001 mg/ml
6,170,382	+		Pf6N2E2_5370	0.33	+0.5
6,170,382	+		Pf6N2E2_5370	0.33	+1.0
6,170,382	+		Pf6N2E2_5370	0.33	+0.4
6,170,383	-		Pf6N2E2_5370	0.33	+1.0
6,170,383	-		Pf6N2E2_5370	0.33	+0.9
6,170,383	-		Pf6N2E2_5370	0.33	+0.2
6,170,383	-		Pf6N2E2_5370	0.33	-1.0
6,170,519	+		Pf6N2E2_5370	0.47	+0.4
6,170,520	-		Pf6N2E2_5370	0.47	+0.2
6,170,546	+		Pf6N2E2_5370	0.50	-0.5
6,170,546	+		Pf6N2E2_5370	0.50	+0.2
6,170,546	+		Pf6N2E2_5370	0.50	+0.7
6,170,547	-		Pf6N2E2_5370	0.50	-0.8
6,170,547	-		Pf6N2E2_5370	0.50	+0.8
6,170,547	-		Pf6N2E2_5370	0.50	-0.2
6,170,547	-		Pf6N2E2_5370	0.50	-0.4
6,170,547	-		Pf6N2E2_5370	0.50	-0.0
6,170,810	+		Pf6N2E2_5370	0.77	+0.4
6,170,810	+		Pf6N2E2_5370	0.77	+0.3
6,170,810	+		Pf6N2E2_5370	0.77	-0.2
6,170,811	-		Pf6N2E2_5370	0.77	-0.6
6,170,840	+		Pf6N2E2_5370	0.80	-0.3
6,170,840	+		Pf6N2E2_5370	0.80	+0.9
6,170,841	-		Pf6N2E2_5370	0.80	+0.2
6,170,847	+		Pf6N2E2_5370	0.81	+0.0
6,171,075	-				+0.8
6,171,095	+				-0.2
6,171,167	-				+1.0
6,171,167	-				+0.1
6,171,457	-				+0.8
6,171,545	+		Pf6N2E2_5371	0.12	-0.4
6,171,545	+		Pf6N2E2_5371	0.12	+0.2
6,171,545	+		Pf6N2E2_5371	0.12	+0.4
6,171,545	+		Pf6N2E2_5371	0.12	-0.4
6,171,545	+		Pf6N2E2_5371	0.12	+0.7
6,171,546	-		Pf6N2E2_5371	0.13	+0.1
6,171,707	-		Pf6N2E2_5371	0.23	+0.8
6,171,707	-		Pf6N2E2_5371	0.23	-0.3
6,171,707	-		Pf6N2E2_5371	0.23	-0.1
6,171,728	+		Pf6N2E2_5371	0.24	-0.3
6,171,728	+		Pf6N2E2_5371	0.24	+0.0
6,171,728	+		Pf6N2E2_5371	0.24	+0.4
6,171,729	-		Pf6N2E2_5371	0.24	+0.4
6,171,729	-		Pf6N2E2_5371	0.24	-1.0
6,171,791	+		Pf6N2E2_5371	0.28	+0.6
6,171,792	-		Pf6N2E2_5371	0.28	+0.7
6,171,914	+		Pf6N2E2_5371	0.36	+0.6
6,171,914	+		Pf6N2E2_5371	0.36	+0.1
6,171,915	-		Pf6N2E2_5371	0.36	+0.1
6,171,932	+		Pf6N2E2_5371	0.37	-1.5
6,171,932	+		Pf6N2E2_5371	0.37	-0.0
6,171,933	-		Pf6N2E2_5371	0.37	+0.6
6,171,933	-		Pf6N2E2_5371	0.37	+0.8
6,171,935	+		Pf6N2E2_5371	0.37	-0.3
6,171,935	+		Pf6N2E2_5371	0.37	+0.5
6,171,935	+		Pf6N2E2_5371	0.37	+1.5
6,171,935	+		Pf6N2E2_5371	0.37	+0.5
6,171,936	-		Pf6N2E2_5371	0.37	+0.6
6,171,936	-		Pf6N2E2_5371	0.37	-0.4
6,171,936	-		Pf6N2E2_5371	0.37	+0.4
6,172,115	-		Pf6N2E2_5371	0.49	-0.4
6,172,115	-		Pf6N2E2_5371	0.49	+0.1
6,172,270	-		Pf6N2E2_5371	0.59	-0.4
6,172,313	+		Pf6N2E2_5371	0.61	+0.6
6,172,314	-		Pf6N2E2_5371	0.62	+0.1
6,172,314	-		Pf6N2E2_5371	0.62	-0.1
6,172,346	+		Pf6N2E2_5371	0.64	+0.2
6,172,347	-		Pf6N2E2_5371	0.64	+0.3
6,172,347	-		Pf6N2E2_5371	0.64	+0.1
6,172,347	-		Pf6N2E2_5371	0.64	-0.3
6,172,347	-		Pf6N2E2_5371	0.64	-0.4
6,172,400	+		Pf6N2E2_5371	0.67	+0.7
6,172,400	+		Pf6N2E2_5371	0.67	-0.3
6,172,400	+		Pf6N2E2_5371	0.67	+0.2
6,172,401	-		Pf6N2E2_5371	0.67	+0.6
6,172,401	-		Pf6N2E2_5371	0.67	+0.7
6,172,401	-		Pf6N2E2_5371	0.67	+0.2
6,172,401	-		Pf6N2E2_5371	0.67	+0.2
6,172,502	+		Pf6N2E2_5371	0.74	+0.9
6,172,502	+		Pf6N2E2_5371	0.74	-0.2
6,172,502	+		Pf6N2E2_5371	0.74	+0.9
6,172,502	+		Pf6N2E2_5371	0.74	-0.4
6,172,503	-		Pf6N2E2_5371	0.74	-0.2
6,172,620	-		Pf6N2E2_5371	0.81	+1.4
6,172,662	-		Pf6N2E2_5371	0.84	-0.5
6,172,937	+				+0.7
6,172,937	+				-0.2
6,172,937	+				+0.1
6,172,938	-				+0.2
6,172,961	-				+0.0
6,173,023	+				-1.4
6,173,023	+				+0.7
6,173,023	+				-0.8
6,173,023	+				+0.2
6,173,023	+				+0.9
6,173,023	+				-0.2
6,173,023	+				-0.3
6,173,023	+				-0.6
6,173,023	+				+0.3
6,173,024	-				+0.7
6,173,024	-				+0.0
6,173,024	-				-0.3
6,173,024	-				+0.4
6,173,024	-				+0.8
6,173,025	+				-0.0
6,173,025	+				+0.3
6,173,025	+				-0.4
6,173,025	+				+0.1
6,173,025	+				-1.2
6,173,026	-				-2.1
6,173,026	-				+0.4
6,173,026	-				+1.0
6,173,026	-				+0.3
6,173,336	-		Pf6N2E2_5372	0.15	-1.6
6,173,501	-		Pf6N2E2_5372	0.23	-0.3
6,173,516	+		Pf6N2E2_5372	0.24	+0.6
6,173,516	+		Pf6N2E2_5372	0.24	+1.1
6,173,775	-		Pf6N2E2_5372	0.36	+0.8
6,173,884	+		Pf6N2E2_5372	0.41	+0.1
6,173,885	-		Pf6N2E2_5372	0.41	+1.2