Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2264

Experiment: Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0001 mg/ml
2,678,003	+		Pf6N2E2_2262	0.45	+0.1
2,678,242	+		Pf6N2E2_2262	0.84	-0.2
2,678,242	+		Pf6N2E2_2262	0.84	+0.0
2,678,242	+		Pf6N2E2_2262	0.84	+0.2
2,678,243	-		Pf6N2E2_2262	0.84	-0.5
2,678,243	-		Pf6N2E2_2262	0.84	+0.4
2,678,374	+				+0.2
2,678,374	+				+0.5
2,678,375	-				-0.4
2,678,375	-				-0.0
2,678,375	-				-0.1
2,678,375	-				+0.2
2,678,380	+				+0.1
2,678,380	+				-0.6
2,678,381	-				+0.1
2,678,430	+				-0.5
2,678,437	-				+0.2
2,678,445	+				+0.6
2,678,446	-				-0.1
2,678,543	+		Pf6N2E2_2263	0.34	+0.2
2,678,544	-		Pf6N2E2_2263	0.35	+0.4
2,678,544	-		Pf6N2E2_2263	0.35	-1.2
2,678,619	+		Pf6N2E2_2263	0.63	+0.8
2,678,619	+		Pf6N2E2_2263	0.63	-0.0
2,678,619	+		Pf6N2E2_2263	0.63	-0.0
2,678,620	-		Pf6N2E2_2263	0.64	+0.0
2,678,620	-		Pf6N2E2_2263	0.64	-0.1
2,678,620	-		Pf6N2E2_2263	0.64	-0.6
2,678,620	-		Pf6N2E2_2263	0.64	-0.0
2,678,620	-		Pf6N2E2_2263	0.64	-0.9
2,678,621	+		Pf6N2E2_2263	0.64	-0.4
2,678,621	+		Pf6N2E2_2263	0.64	-0.2
2,678,621	+		Pf6N2E2_2263	0.64	-0.4
2,678,621	+		Pf6N2E2_2263	0.64	-0.1
2,678,621	+		Pf6N2E2_2263	0.64	-0.5
2,678,621	+		Pf6N2E2_2263	0.64	+0.1
2,678,622	-		Pf6N2E2_2263	0.64	+0.0
2,678,622	-		Pf6N2E2_2263	0.64	-0.5
2,678,622	-		Pf6N2E2_2263	0.64	+0.0
2,678,622	-		Pf6N2E2_2263	0.64	+0.1
2,678,622	-		Pf6N2E2_2263	0.64	-0.3
2,678,622	-		Pf6N2E2_2263	0.64	+0.3
2,678,703	+				+0.3
2,678,704	-				+0.7
2,678,722	+				+0.8
2,678,722	+				-0.5
2,678,722	+				-0.6
2,678,722	+				-0.3
2,678,723	-				+0.2
2,678,742	-				-0.1
2,678,761	-				+0.3
2,678,799	+				-0.2
2,678,799	+				-0.2
2,678,800	-				-0.2
2,678,850	+				-1.3
2,678,892	-		Pf6N2E2_2264	0.10	-0.7
2,678,901	-		Pf6N2E2_2264	0.11	+0.2
2,679,002	+		Pf6N2E2_2264	0.24	-1.0
2,679,002	+		Pf6N2E2_2264	0.24	-1.1
2,679,003	-		Pf6N2E2_2264	0.24	-0.6
2,679,003	-		Pf6N2E2_2264	0.24	-0.9
2,679,173	+		Pf6N2E2_2264	0.44	-1.9
2,679,173	+		Pf6N2E2_2264	0.44	+0.3
2,679,229	-		Pf6N2E2_2264	0.51	+0.6
2,679,229	-		Pf6N2E2_2264	0.51	+0.2
2,679,366	-		Pf6N2E2_2264	0.67	-1.5
2,679,590	+				-1.3
2,679,591	-				-0.7
2,679,669	+				+0.7
2,679,670	-				+0.2
2,679,699	+				+0.2
2,679,699	+				+0.9
2,679,699	+				-1.1
2,679,700	-				+0.3
2,679,738	+				+0.6
2,679,776	-		Pf6N2E2_2265	0.14	+0.1
2,679,836	-		Pf6N2E2_2265	0.25	+0.1
2,680,030	+		Pf6N2E2_2265	0.61	-0.4
2,680,031	-		Pf6N2E2_2265	0.61	+0.5
2,680,031	-		Pf6N2E2_2265	0.61	+0.1
2,680,031	-		Pf6N2E2_2265	0.61	-0.5
2,680,041	-		Pf6N2E2_2265	0.63	+0.0
2,680,193	-				+0.5
2,680,193	-				-0.0
2,680,193	-				-0.2
2,680,243	+				+0.8
2,680,243	+				+0.5
2,680,243	+				+0.1
2,680,243	+				+0.7
2,680,243	+				+0.4
2,680,243	+				+0.2
2,680,243	+				+0.3
2,680,243	+				+1.3
2,680,244	-				-0.1
2,680,244	-				+0.4
2,680,244	-				+0.8
2,680,244	-				-0.2
2,680,244	-				+0.6
2,680,244	-				+0.4
2,680,244	-				-0.1
2,680,244	-				-1.1
2,680,244	-				-0.7
2,680,244	-				+0.9
2,680,249	+				+0.0
2,680,250	-				+0.3
2,680,250	-				+0.5
2,680,250	-				-0.0
2,680,262	+				-0.6
2,680,262	+				-0.8
2,680,262	+				-0.5
2,680,262	+				+0.6
2,680,263	-				+0.3
2,680,263	-				-0.3
2,680,263	-				-1.0
2,680,263	-				-0.2
2,680,286	+				+1.0
2,680,286	+				-0.3
2,680,286	+				+0.7
2,680,287	-				-0.6
2,680,323	+				+0.3
2,680,323	+				-0.2
2,680,323	+				+0.8
2,680,323	+				-0.2
2,680,323	+				+0.6
2,680,323	+				-0.5
2,680,324	-				-0.6
2,680,324	-				+0.4
2,680,324	-				-0.1
2,680,364	+				+0.1
2,680,364	+				+0.2
2,680,365	-				+0.7
2,680,365	-				-0.3
2,680,365	-				+0.6
2,680,365	-				+0.6
2,680,378	+				-0.1
2,680,378	+				+0.1
2,680,443	+				+0.8
2,680,444	-				-0.4
2,680,533	+		Pf6N2E2_2266	0.19	+0.9
2,680,616	+		Pf6N2E2_2266	0.32	-1.1
2,680,617	-		Pf6N2E2_2266	0.32	+0.5