Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2029

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
2,130,870	+		Ga0059261_2028	0.75	+0.2
2,130,871	-		Ga0059261_2028	0.75	-0.1
2,130,871	-		Ga0059261_2028	0.75	-0.8
2,131,034	+				-0.4
2,131,034	+				+1.5
2,131,034	+				-0.2
2,131,034	+				+0.4
2,131,034	+				+0.7
2,131,034	+				-0.0
2,131,034	+				+0.6
2,131,034	+				+0.3
2,131,034	+				+0.0
2,131,035	-				-0.2
2,131,035	-				-0.2
2,131,035	-				+0.1
2,131,035	-				+0.1
2,131,203	+				-0.7
2,131,547	+				-0.0
2,131,654	+				-0.7
2,131,655	-				-1.2
2,131,655	-				+0.3
2,131,670	-				+0.7
2,131,671	+				-0.0
2,131,710	+				+0.2
2,131,710	+				-0.4
2,131,710	+				-0.0
2,131,710	+				+0.3
2,131,720	+				-0.1
2,131,720	+				-0.1
2,131,720	+				+0.8
2,131,720	+				-0.2
2,131,720	+				+0.6
2,131,721	-				-0.5
2,131,721	-				-0.0
2,131,721	-				-1.8
2,131,721	-				+0.2
2,131,814	+				-0.3
2,131,814	+				+0.2
2,131,814	+				-0.8
2,131,931	+		Ga0059261_2029	0.16	+0.6
2,131,932	-		Ga0059261_2029	0.16	+0.5
2,131,932	-		Ga0059261_2029	0.16	-0.0
2,131,932	-		Ga0059261_2029	0.16	+0.4
2,131,932	-		Ga0059261_2029	0.16	+0.0
2,132,030	+		Ga0059261_2029	0.25	+0.5
2,132,031	-		Ga0059261_2029	0.25	+0.4
2,132,031	-		Ga0059261_2029	0.25	+0.3
2,132,195	+		Ga0059261_2029	0.41	+0.1
2,132,195	+		Ga0059261_2029	0.41	+0.2
2,132,195	+		Ga0059261_2029	0.41	-0.2
2,132,195	+		Ga0059261_2029	0.41	-0.5
2,132,196	-		Ga0059261_2029	0.41	-0.8
2,132,196	-		Ga0059261_2029	0.41	-0.0
2,132,196	-		Ga0059261_2029	0.41	-0.5
2,132,796	+				+1.5
2,132,796	+				+0.3
2,132,796	+				-0.0
2,132,796	+				+0.9
2,132,796	+				+0.0
2,132,796	+				+0.7
2,132,797	-				+0.5
2,132,797	-				-0.4
2,132,797	-				-1.4
2,132,797	-				-0.8
2,132,797	-				+1.2
2,132,797	-				-0.1
2,132,797	-				-1.4
2,132,803	+				-0.1
2,132,803	+				+0.9
2,132,804	-				-0.8
2,132,867	+				+0.4
2,132,867	+				-0.1
2,132,867	+				+0.1
2,132,867	+				+0.5
2,132,868	-				+0.6
2,132,868	-				-0.2
2,132,868	-				-0.3
2,132,868	-				+0.2
2,132,868	-				-0.0
2,132,874	+				+0.2
2,132,874	+				+0.6
2,132,874	+				-0.3
2,132,875	-				+0.0
2,132,875	-				+0.4
2,132,875	-				-0.3
2,132,875	-				-0.3
2,132,882	-				+0.5
2,132,882	-				+1.3
2,132,900	+				-1.0
2,132,900	+				+0.3
2,132,901	-				-0.2
2,132,908	+				-0.7
2,132,911	+				-0.7
2,132,911	+				-0.5
2,132,912	-				+0.5
2,132,918	-				+0.4
2,132,918	-				+0.0
2,132,918	-				+1.0
2,132,997	-		Ga0059261_2030	0.14	-0.3
2,133,004	+		Ga0059261_2030	0.16	+0.0
2,133,004	+		Ga0059261_2030	0.16	-0.3
2,133,004	+		Ga0059261_2030	0.16	-1.0
2,133,004	+		Ga0059261_2030	0.16	-0.4
2,133,004	+		Ga0059261_2030	0.16	-0.1
2,133,004	+		Ga0059261_2030	0.16	+0.0
2,133,004	+		Ga0059261_2030	0.16	+0.0
2,133,004	+		Ga0059261_2030	0.16	+0.6
2,133,004	+		Ga0059261_2030	0.16	-0.6
2,133,004	+		Ga0059261_2030	0.16	-0.3
2,133,004	+		Ga0059261_2030	0.16	+0.7
2,133,004	+				-1.3
2,133,005	-		Ga0059261_2030	0.16	+0.5
2,133,005	-		Ga0059261_2030	0.16	-0.7
2,133,005	-		Ga0059261_2030	0.16	+0.2
2,133,005	-		Ga0059261_2030	0.16	+0.3
2,133,005	-		Ga0059261_2030	0.16	+0.3
2,133,005	-		Ga0059261_2030	0.16	-1.4
2,133,005	-		Ga0059261_2030	0.16	+0.8
2,133,005	-		Ga0059261_2030	0.16	-0.2
2,133,005	-		Ga0059261_2030	0.16	-0.5
2,133,005	-		Ga0059261_2030	0.16	+0.1
2,133,005	-		Ga0059261_2030	0.16	-0.6
2,133,091	+		Ga0059261_2030	0.32	-0.5
2,133,091	+		Ga0059261_2030	0.32	+1.3
2,133,091	+		Ga0059261_2030	0.32	+1.3
2,133,091	+		Ga0059261_2030	0.32	+0.0
2,133,091	+		Ga0059261_2030	0.32	-0.3
2,133,092	-		Ga0059261_2030	0.32	+0.0
2,133,092	-		Ga0059261_2030	0.32	+0.6
2,133,092	-		Ga0059261_2030	0.32	+0.9
2,133,286	+		Ga0059261_2030	0.68	-0.1
2,133,292	+		Ga0059261_2030	0.69	-3.8
2,133,292	+		Ga0059261_2030	0.69	+0.9
2,133,292	+		Ga0059261_2030	0.69	-0.0
2,133,292	+		Ga0059261_2030	0.69	+0.3
2,133,292	+		Ga0059261_2030	0.69	+0.6
2,133,293	-		Ga0059261_2030	0.69	-0.2
2,133,293	-		Ga0059261_2030	0.69	-1.1
2,133,293	-		Ga0059261_2030	0.69	-0.1
2,133,293	-		Ga0059261_2030	0.69	-0.3
2,133,293	-		Ga0059261_2030	0.69	+0.3
2,133,293	-		Ga0059261_2030	0.69	-0.3
2,133,464	+				+0.1
2,133,464	+				+0.8
2,133,464	+				+0.6
2,133,464	+				+0.1
2,133,464	+				+0.4
2,133,464	+				-1.1
2,133,464	+				-0.6
2,133,464	+				-0.4
2,133,464	+				+0.2
2,133,464	+				-1.8
2,133,465	-				+0.4
2,133,465	-				-0.3
2,133,465	-				+0.2
2,133,465	-				+0.1
2,133,465	-				+0.3
2,133,465	-				-0.4
2,133,465	-				+0.3
2,133,465	-				-0.2
2,133,465	-				-0.1
2,133,465	-				+0.2
2,133,465	-				+0.5
2,133,465	-				-0.4
2,133,486	+				+2.0
2,133,486	+				-0.1
2,133,486	+				-0.6
2,133,486	+				+0.0
2,133,486	+				-0.8
2,133,487	-				+0.1
2,133,487	-				+0.6
2,133,538	+				+0.1
2,133,565	+				-0.3
2,133,627	+				+0.1
2,133,627	+				+0.3
2,133,627	+				+0.5
2,133,627	+				-0.7
2,133,627	+				-0.4
2,133,627	+				-0.2
2,133,628	-				+0.3
2,133,628	-				+0.3
2,133,628	-				-0.3
2,133,628	-				-0.0
2,133,628	-				-0.8
2,133,628	-				+1.0
2,133,628	-				-0.2
2,133,664	-		Ga0059261_2031	0.12	+0.4
2,133,664	-		Ga0059261_2031	0.12	+0.2
2,133,781	-		Ga0059261_2031	0.23	-1.0