Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03033

Experiment: PYE with Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0001 mg/ml
3,187,143	+		CCNA_03032	0.40	-0.5
3,187,206	-		CCNA_03032	0.44	+0.3
3,187,213	+		CCNA_03032	0.45	-0.2
3,187,218	+		CCNA_03032	0.45	+0.1
3,187,218	+		CCNA_03032	0.45	-0.7
3,187,227	-		CCNA_03032	0.46	+0.8
3,187,263	-		CCNA_03032	0.48	+2.6
3,187,286	-		CCNA_03032	0.50	+0.9
3,187,286	-		CCNA_03032	0.50	-0.5
3,187,305	+		CCNA_03032	0.51	-0.4
3,187,320	+		CCNA_03032	0.52	+3.2
3,187,328	-		CCNA_03032	0.53	+0.2
3,187,395	-		CCNA_03032	0.58	-0.5
3,187,397	-		CCNA_03032	0.58	+0.3
3,187,402	-		CCNA_03032	0.58	+0.8
3,187,418	+		CCNA_03032	0.59	+0.9
3,187,418	+		CCNA_03032	0.59	-0.5
3,187,418	+		CCNA_03032	0.59	+0.3
3,187,433	+		CCNA_03032	0.60	+0.7
3,187,447	+		CCNA_03032	0.61	+1.2
3,187,452	+		CCNA_03032	0.62	+1.0
3,187,488	-		CCNA_03032	0.64	+1.3
3,187,488	-		CCNA_03032	0.64	-0.7
3,187,516	+		CCNA_03032	0.66	-1.6
3,187,516	+		CCNA_03032	0.66	-1.9
3,187,524	-		CCNA_03032	0.67	+0.3
3,187,524	-		CCNA_03032	0.67	-0.4
3,187,538	+		CCNA_03032	0.68	-0.2
3,187,538	+		CCNA_03032	0.68	+0.6
3,187,538	+		CCNA_03032	0.68	+0.7
3,187,540	+		CCNA_03032	0.68	-0.5
3,187,540	+		CCNA_03032	0.68	-0.9
3,187,545	+		CCNA_03032	0.68	-1.5
3,187,545	+		CCNA_03032	0.68	-0.1
3,187,551	+		CCNA_03032	0.69	-0.7
3,187,559	-		CCNA_03032	0.69	+1.4
3,187,559	-		CCNA_03032	0.69	+1.2
3,187,559	-		CCNA_03032	0.69	+1.2
3,187,559	-		CCNA_03032	0.69	+1.3
3,187,559	-		CCNA_03032	0.69	+0.6
3,187,559	-		CCNA_03032	0.69	+0.1
3,187,569	+		CCNA_03032	0.70	+4.2
3,187,582	+		CCNA_03032	0.71	-1.1
3,187,584	+		CCNA_03032	0.71	+0.3
3,187,590	-		CCNA_03032	0.72	+0.7
3,187,599	+		CCNA_03032	0.72	-0.7
3,187,600	-		CCNA_03032	0.72	+0.5
3,187,659	+		CCNA_03032	0.76	+0.7
3,187,659	+		CCNA_03032	0.76	-1.0
3,187,667	-		CCNA_03032	0.77	+2.0
3,187,667	-		CCNA_03032	0.77	-0.4
3,187,667	-		CCNA_03032	0.77	+0.2
3,187,667	-		CCNA_03032	0.77	-0.7
3,187,687	+		CCNA_03032	0.78	-0.7
3,187,687	+		CCNA_03032	0.78	-1.5
3,187,687	+		CCNA_03032	0.78	+0.1
3,187,687	+		CCNA_03032	0.78	+0.2
3,187,687	+		CCNA_03032	0.78	-0.4
3,187,687	+		CCNA_03032	0.78	-2.1
3,187,688	-		CCNA_03032	0.79	+0.3
3,187,695	-		CCNA_03032	0.79	+0.6
3,187,695	-		CCNA_03032	0.79	+0.6
3,187,695	-		CCNA_03032	0.79	-0.4
3,187,695	-		CCNA_03032	0.79	-0.1
3,187,695	-		CCNA_03032	0.79	-0.4
3,187,695	-		CCNA_03032	0.79	+1.9
3,187,695	-		CCNA_03032	0.79	+1.1
3,187,695	-		CCNA_03032	0.79	+0.4
3,187,695	-		CCNA_03032	0.79	+0.0
3,187,695	-		CCNA_03032	0.79	+2.0
3,187,767	+		CCNA_03032	0.84	-1.7
3,187,775	-		CCNA_03032	0.85	+2.5
3,187,829	-		CCNA_03032	0.89	-0.1
3,187,845	-		CCNA_03032	0.90	+0.2
3,187,851	-				+0.3
3,187,859	-				+0.1
3,187,870	+				+1.2
3,187,871	-				-0.1
3,187,872	-				+1.0
3,187,878	-				+0.0
3,187,909	+				-1.0
3,187,909	+				-0.4
3,187,909	+				-0.2
3,187,917	-				-0.1
3,187,917	-				+0.5
3,187,927	-				+1.7
3,187,936	+				-1.0
3,187,954	+				+0.3
3,187,954	+				+0.9
3,187,962	-				+0.5
3,188,023	+				+1.6
3,188,031	-				-0.4
3,188,038	+				+0.2
3,188,120	-				+0.8
3,188,122	+				+0.6
3,188,122	+				+0.0
3,188,123	+				+0.8
3,188,130	-				+0.0
3,188,131	-				+0.9
3,188,155	+		CCNA_03033	0.10	+0.5
3,188,155	+		CCNA_03033	0.10	+0.6
3,188,163	-		CCNA_03033	0.11	+0.6
3,188,163	-		CCNA_03033	0.11	+1.9
3,188,187	-		CCNA_03033	0.14	-0.1
3,188,206	+		CCNA_03033	0.16	+1.0
3,188,221	-		CCNA_03033	0.18	-0.3
3,188,221	-		CCNA_03033	0.18	-0.8
3,188,238	+		CCNA_03033	0.20	+1.7
3,188,246	-		CCNA_03033	0.21	+0.1
3,188,246	-		CCNA_03033	0.21	+0.2
3,188,247	+		CCNA_03033	0.21	+1.1
3,188,247	+		CCNA_03033	0.21	+2.3
3,188,310	+		CCNA_03033	0.29	+0.4
3,188,310	+		CCNA_03033	0.29	+1.0
3,188,320	+		CCNA_03033	0.30	+1.2
3,188,320	+		CCNA_03033	0.30	-1.0
3,188,323	-		CCNA_03033	0.30	+0.5
3,188,323	-		CCNA_03033	0.30	+0.6
3,188,327	+		CCNA_03033	0.31	+1.4
3,188,328	-		CCNA_03033	0.31	-0.9
3,188,328	-		CCNA_03033	0.31	-0.4
3,188,328	-		CCNA_03033	0.31	+1.8
3,188,400	+		CCNA_03033	0.40	+1.3
3,188,417	+		CCNA_03033	0.42	+1.8
3,188,425	-		CCNA_03033	0.43	-0.7
3,188,425	-		CCNA_03033	0.43	-0.5
3,188,459	-		CCNA_03033	0.47	+0.2
3,188,495	+		CCNA_03033	0.51	+1.3
3,188,503	-		CCNA_03033	0.52	-2.4
3,188,508	-		CCNA_03033	0.53	+0.7
3,188,510	+		CCNA_03033	0.53	+1.7
3,188,532	+		CCNA_03033	0.56	-0.3
3,188,532	+		CCNA_03033	0.56	+0.1
3,188,532	+		CCNA_03033	0.56	+1.4
3,188,540	-		CCNA_03033	0.57	-0.6
3,188,540	-		CCNA_03033	0.57	+1.9
3,188,565	+		CCNA_03033	0.60	+0.8
3,188,611	+		CCNA_03033	0.65	+1.1
3,188,613	+		CCNA_03033	0.66	+0.3
3,188,672	+		CCNA_03033	0.73	+1.7
3,188,693	-				+1.6
3,188,726	-		CCNA_03033	0.79	-0.0
3,188,744	+		CCNA_03033	0.81	+0.7
3,188,776	+		CCNA_03033	0.85	+0.6
3,188,870	-				+0.0
3,188,870	-				+0.0
3,188,891	+				+1.2
3,188,933	+		CCNA_03034	0.13	+0.9
3,188,950	-		CCNA_03034	0.22	+1.0
3,188,979	-		CCNA_03034	0.36	+0.9
3,188,988	+		CCNA_03034	0.41	-0.4
3,188,988	+		CCNA_03034	0.41	+0.4
3,188,990	-		CCNA_03034	0.42	-0.2
3,189,024	+		CCNA_03034	0.59	+1.0
3,189,028	+		CCNA_03034	0.62	+1.3
3,189,087	+				+1.4
3,189,100	+				+0.6
3,189,107	-				+1.1
3,189,130	+				+1.5
3,189,130	+				+0.3
3,189,130	+				-1.5
3,189,138	-				-0.1
3,189,140	+				+0.7
3,189,140	+				+0.2
3,189,141	+				+0.1
3,189,148	-				-0.1
3,189,148	-				-1.1
3,189,148	-				+0.3
3,189,175	+				+1.1
3,189,198	-				+0.8
3,189,198	-				+0.8
3,189,255	-				+1.4
3,189,264	-				+0.4
3,189,277	+				+1.2
3,189,277	+				+1.3
3,189,290	-		CCNA_03035	0.10	-1.1
3,189,303	-		CCNA_03035	0.11	+1.0
3,189,350	+		CCNA_03035	0.16	-0.8
3,189,363	-		CCNA_03035	0.17	+0.9
3,189,363	-		CCNA_03035	0.17	+0.5
3,189,380	+		CCNA_03035	0.19	-0.7
3,189,380	+		CCNA_03035	0.19	-0.5
3,189,388	-		CCNA_03035	0.19	+0.9
3,189,388	-		CCNA_03035	0.19	+1.3
3,189,388	-		CCNA_03035	0.19	+1.6
3,189,534	-		CCNA_03035	0.33	+0.4
3,189,597	+		CCNA_03035	0.38	-1.7
3,189,605	-		CCNA_03035	0.39	+0.7
3,189,658	-		CCNA_03035	0.44	+1.2
3,189,677	+		CCNA_03035	0.46	+0.4
3,189,677	+		CCNA_03035	0.46	+0.0
3,189,680	-		CCNA_03035	0.46	+0.1
3,189,682	+		CCNA_03035	0.46	+0.9
3,189,685	-		CCNA_03035	0.47	+2.8
3,189,685	-		CCNA_03035	0.47	+0.2
3,189,688	+		CCNA_03035	0.47	-0.1
3,189,714	-		CCNA_03035	0.49	+0.8
3,189,715	-		CCNA_03035	0.49	+0.5
3,189,732	+		CCNA_03035	0.51	-1.5
3,189,740	-		CCNA_03035	0.52	+0.7
3,189,740	-		CCNA_03035	0.52	-2.1
3,189,781	+		CCNA_03035	0.55	+0.2
3,189,787	+		CCNA_03035	0.56	+0.0
3,189,787	+		CCNA_03035	0.56	-0.5
3,189,789	-		CCNA_03035	0.56	+0.4
3,189,795	-		CCNA_03035	0.57	+0.4
3,189,815	-		CCNA_03035	0.58	-0.0
3,189,833	-		CCNA_03035	0.60	+0.2
3,189,833	-		CCNA_03035	0.60	+0.1
3,189,833	-		CCNA_03035	0.60	+1.0
3,189,866	+		CCNA_03035	0.63	+0.6
3,189,874	-		CCNA_03035	0.64	+1.4
3,189,874	-		CCNA_03035	0.64	+1.5
3,189,874	-		CCNA_03035	0.64	+1.2
3,189,875	-		CCNA_03035	0.64	+1.2