Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02763

Experiment: PYE with Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0001 mg/ml
2,923,968	-				+0.4
2,923,995	+				-0.3
2,923,995	+				-1.6
2,923,997	+				+1.8
2,923,997	+				+0.7
2,924,003	-				-1.3
2,924,003	-				+0.5
2,924,003	-				-1.5
2,924,112	+				+1.1
2,924,120	-				+0.2
2,924,120	-				-0.8
2,924,189	-				+0.9
2,924,193	+		CCNA_02762	0.10	+0.2
2,924,238	-		CCNA_02762	0.17	-0.3
2,924,238	-		CCNA_02762	0.17	-0.3
2,924,243	-		CCNA_02762	0.18	-0.1
2,924,299	+		CCNA_02762	0.26	+0.4
2,924,299	+		CCNA_02762	0.26	+0.7
2,924,299	+		CCNA_02762	0.26	+0.7
2,924,299	+		CCNA_02762	0.26	+0.6
2,924,307	-		CCNA_02762	0.27	+0.1
2,924,307	-		CCNA_02762	0.27	+0.3
2,924,323	-		CCNA_02762	0.30	-0.5
2,924,368	-		CCNA_02762	0.37	-1.0
2,924,368	-		CCNA_02762	0.37	-0.6
2,924,368	-		CCNA_02762	0.37	-0.1
2,924,368	-		CCNA_02762	0.37	+1.2
2,924,381	+		CCNA_02762	0.39	+1.0
2,924,393	+		CCNA_02762	0.40	-0.1
2,924,403	-		CCNA_02762	0.42	-1.1
2,924,408	-		CCNA_02762	0.43	-0.7
2,924,423	+		CCNA_02762	0.45	+1.8
2,924,433	+		CCNA_02762	0.46	+0.7
2,924,441	-		CCNA_02762	0.48	+0.4
2,924,465	+		CCNA_02762	0.51	+1.3
2,924,482	+		CCNA_02762	0.54	+0.1
2,924,534	-		CCNA_02762	0.62	+1.1
2,924,540	-		CCNA_02762	0.62	+0.4
2,924,547	+		CCNA_02762	0.64	-0.8
2,924,547	+		CCNA_02762	0.64	-0.0
2,924,547	+		CCNA_02762	0.64	+0.6
2,924,555	-		CCNA_02762	0.65	-0.3
2,924,555	-		CCNA_02762	0.65	-1.5
2,924,602	-		CCNA_02762	0.72	-1.2
2,924,602	-		CCNA_02762	0.72	+0.4
2,924,643	+		CCNA_02762	0.78	+1.4
2,924,651	-		CCNA_02762	0.79	+0.7
2,924,691	+		CCNA_02762	0.85	-0.3
2,924,691	+		CCNA_02762	0.85	-0.8
2,924,699	-		CCNA_02762	0.86	-0.4
2,924,736	+				-1.5
2,924,744	-				+0.2
2,924,840	+				-0.4
2,924,850	+				-1.9
2,924,918	+				+0.3
2,924,951	-				+0.6
2,924,961	+				-0.1
2,924,976	+				-0.2
2,924,976	+				-1.0
2,924,976	+				-1.2
2,924,976	+				-0.8
2,924,984	-				-1.4
2,924,984	-				-0.5
2,924,984	-				-0.1
2,924,993	-				-0.1
2,925,035	+				-0.0
2,925,066	-				+0.3
2,925,076	-		CCNA_02763	0.11	-0.8
2,925,079	+		CCNA_02763	0.11	-2.4
2,925,098	+		CCNA_02763	0.13	-1.4
2,925,126	+		CCNA_02763	0.15	+1.1
2,925,126	+		CCNA_02763	0.15	-0.8
2,925,134	-		CCNA_02763	0.15	-1.6
2,925,206	+		CCNA_02763	0.21	+0.6
2,925,206	+		CCNA_02763	0.21	-1.8
2,925,214	-		CCNA_02763	0.22	+0.4
2,925,230	-		CCNA_02763	0.23	-0.5
2,925,247	+		CCNA_02763	0.25	-0.1
2,925,297	-		CCNA_02763	0.29	-0.3
2,925,439	+		CCNA_02763	0.40	+0.4
2,925,439	+		CCNA_02763	0.40	-1.0
2,925,439	+		CCNA_02763	0.40	-0.9
2,925,439	+		CCNA_02763	0.40	+0.5
2,925,447	-		CCNA_02763	0.41	-1.4
2,925,447	-		CCNA_02763	0.41	+0.0
2,925,447	-		CCNA_02763	0.41	-1.0
2,925,459	+		CCNA_02763	0.42	-0.1
2,925,462	-		CCNA_02763	0.42	-0.8
2,925,466	+				+0.2
2,925,469	-		CCNA_02763	0.42	+0.6
2,925,474	-		CCNA_02763	0.43	-0.2
2,925,476	+		CCNA_02763	0.43	-0.9
2,925,476	+		CCNA_02763	0.43	+0.0
2,925,476	+		CCNA_02763	0.43	-0.3
2,925,490	+		CCNA_02763	0.44	+0.2
2,925,531	+		CCNA_02763	0.47	-0.5
2,925,531	+		CCNA_02763	0.47	-2.0
2,925,539	-		CCNA_02763	0.48	-0.1
2,925,622	+		CCNA_02763	0.55	-1.2
2,925,630	-		CCNA_02763	0.55	-0.4
2,925,630	-		CCNA_02763	0.55	-0.0
2,925,633	+		CCNA_02763	0.56	+1.0
2,925,643	-		CCNA_02763	0.56	-0.3
2,925,665	+		CCNA_02763	0.58	+0.9
2,925,665	+		CCNA_02763	0.58	-0.3
2,925,665	+		CCNA_02763	0.58	+0.7
2,925,665	+		CCNA_02763	0.58	-1.5
2,925,665	+		CCNA_02763	0.58	+1.0
2,925,665	+		CCNA_02763	0.58	-1.1
2,925,665	+		CCNA_02763	0.58	+1.8
2,925,668	-		CCNA_02763	0.58	-0.8
2,925,670	+		CCNA_02763	0.59	+0.5
2,925,673	-		CCNA_02763	0.59	-1.3
2,925,673	-		CCNA_02763	0.59	-0.5
2,925,673	-		CCNA_02763	0.59	-2.3
2,925,673	-		CCNA_02763	0.59	+0.4
2,925,673	-		CCNA_02763	0.59	-0.1
2,925,673	-		CCNA_02763	0.59	-1.7
2,925,673	-		CCNA_02763	0.59	-0.5
2,925,673	-		CCNA_02763	0.59	+0.6
2,925,673	-		CCNA_02763	0.59	-1.3
2,925,673	-		CCNA_02763	0.59	-1.4
2,925,673	-		CCNA_02763	0.59	-1.5
2,925,673	-		CCNA_02763	0.59	-0.2
2,925,673	-		CCNA_02763	0.59	-1.5
2,925,673	-		CCNA_02763	0.59	-0.7
2,925,673	-		CCNA_02763	0.59	-0.2
2,925,673	-		CCNA_02763	0.59	-0.2
2,925,673	-		CCNA_02763	0.59	+0.8
2,925,745	-		CCNA_02763	0.65	-0.1
2,925,750	+		CCNA_02763	0.65	-1.0
2,925,750	+		CCNA_02763	0.65	+0.7
2,925,760	+		CCNA_02763	0.66	-1.7
2,925,768	-		CCNA_02763	0.67	-1.1
2,925,769	-		CCNA_02763	0.67	+1.8
2,925,801	+		CCNA_02763	0.69	-0.9
2,925,802	-		CCNA_02763	0.69	-0.8
2,925,818	-		CCNA_02763	0.71	-1.4
2,925,887	-		CCNA_02763	0.76	+0.0
2,925,889	+		CCNA_02763	0.76	-1.8
2,925,905	-		CCNA_02763	0.78	-1.3
2,925,977	-		CCNA_02763	0.83	-0.2
2,925,977	-		CCNA_02763	0.83	-2.7
2,925,977	-		CCNA_02763	0.83	+0.5
2,925,977	-		CCNA_02763	0.83	-1.4
2,925,977	-		CCNA_02763	0.83	-0.8
2,925,977	-		CCNA_02763	0.83	-0.2
2,926,009	+		CCNA_02763	0.86	+1.8
2,926,053	-		CCNA_02763	0.89	-1.2
2,926,063	-				-0.2
2,926,071	-				-0.5
2,926,126	+				-2.1
2,926,134	+				-2.0
2,926,134	+				+0.6
2,926,142	-				-1.7
2,926,173	-				+0.1
2,926,184	+				+0.2
2,926,184	+				-1.2
2,926,187	-				-0.6
2,926,189	+				+0.6
2,926,192	-				+1.4
2,926,197	-				-2.0
2,926,197	-				-1.4
2,926,207	-				+0.2
2,926,213	+				-0.7
2,926,221	-				-0.5
2,926,221	-				-0.8
2,926,221	-				-0.6
2,926,221	-				-0.6
2,926,221	-				-1.5
2,926,221	-				-0.6
2,926,226	-				+1.6
2,926,248	-		CCNA_02764	0.14	-0.8
2,926,257	-		CCNA_02764	0.17	+0.0
2,926,257	-		CCNA_02764	0.17	+1.4
2,926,291	-		CCNA_02764	0.32	-0.6
2,926,291	-		CCNA_02764	0.32	-0.4
2,926,318	+		CCNA_02764	0.43	-1.2
2,926,323	+		CCNA_02764	0.45	-0.3
2,926,351	+				+3.4
2,926,361	+		CCNA_02764	0.61	+0.5
2,926,379	+		CCNA_02764	0.68	-1.6
2,926,379	+		CCNA_02764	0.68	-1.6
2,926,379	+		CCNA_02764	0.68	-0.3
2,926,379	+		CCNA_02764	0.68	+0.4
2,926,379	+		CCNA_02764	0.68	-1.3
2,926,379	+		CCNA_02764	0.68	+0.0
2,926,379	+		CCNA_02764	0.68	-0.2
2,926,379	+		CCNA_02764	0.68	-0.5
2,926,379	+		CCNA_02764	0.68	+0.0
2,926,387	-		CCNA_02764	0.72	+1.5
2,926,387	-		CCNA_02764	0.72	+1.2
2,926,387	-		CCNA_02764	0.72	+0.4
2,926,387	-		CCNA_02764	0.72	-0.6
2,926,466	+				-1.9
2,926,466	-				-0.9
2,926,497	+				-0.2
2,926,503	+				+0.0
2,926,511	-				+0.3
2,926,511	-				+0.4
2,926,511	-				-1.1
2,926,548	+		CCNA_02765	0.11	-0.2
2,926,569	-		CCNA_02765	0.16	-1.3
2,926,616	-		CCNA_02765	0.29	-0.9
2,926,638	-		CCNA_02765	0.34	-0.2
2,926,638	-		CCNA_02765	0.34	+1.0
2,926,658	+		CCNA_02765	0.40	-0.3
2,926,659	+		CCNA_02765	0.40	+1.1
2,926,667	-		CCNA_02765	0.42	+0.2
2,926,667	-		CCNA_02765	0.42	-1.6
2,926,719	-		CCNA_02765	0.55	-1.6
2,926,794	+		CCNA_02765	0.75	+0.3
2,926,807	+		CCNA_02765	0.78	+1.8
2,926,810	-		CCNA_02765	0.79	+0.6
2,926,831	+		CCNA_02765	0.85	+0.2
2,926,854	-				+0.2
2,926,866	-				-0.7
2,926,867	-				+1.8
2,926,890	+				-0.5
2,926,890	+				-0.9
2,926,906	+				-1.8
2,926,906	+				-0.2
2,926,906	+				+2.4
2,926,906	+				+0.0
2,926,906	+				-2.1
2,926,906	+				+1.2
2,926,906	+				+0.9
2,926,919	-		CCNA_02766	0.12	+1.1
2,926,929	-		CCNA_02766	0.15	+0.4
2,926,929	-		CCNA_02766	0.15	+2.1
2,926,936	-		CCNA_02766	0.18	+0.1
2,926,945	+		CCNA_02766	0.21	-0.4
2,926,976	-		CCNA_02766	0.32	+1.1
2,926,997	-		CCNA_02766	0.40	-0.6
2,927,041	-		CCNA_02766	0.56	-0.7
2,927,041	-		CCNA_02766	0.56	+1.1
2,927,046	-		CCNA_02766	0.57	-0.1
2,927,070	+		CCNA_02766	0.66	-0.5
2,927,092	-		CCNA_02766	0.74	+0.5
2,927,156	-				+0.4
2,927,157	-				-0.7
2,927,173	+				+0.4
2,927,173	+				-1.8
2,927,181	-				+0.5
2,927,181	-				+0.8