Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02310

Experiment: PYE with Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0001 mg/ml
2,454,016	+		CCNA_02308	0.63	-1.1
2,454,118	+		CCNA_02308	0.75	-1.9
2,454,119	-		CCNA_02308	0.75	-0.4
2,454,148	-		CCNA_02308	0.78	-0.1
2,454,161	-		CCNA_02308	0.80	-3.3
2,454,166	+		CCNA_02308	0.81	+1.5
2,454,173	+		CCNA_02308	0.81	-0.5
2,454,181	-		CCNA_02308	0.82	-0.3
2,454,181	-		CCNA_02308	0.82	+0.2
2,454,222	+		CCNA_02308	0.87	-0.8
2,454,230	-		CCNA_02308	0.88	-0.3
2,454,230	-		CCNA_02308	0.88	-1.5
2,454,230	-		CCNA_02308	0.88	+0.6
2,454,230	-		CCNA_02308	0.88	-0.5
2,454,239	+		CCNA_02308	0.89	+2.0
2,454,254	+				-0.3
2,454,299	+				-0.4
2,454,339	+				-2.0
2,454,347	-				-2.2
2,454,352	-				-1.9
2,454,392	+				+1.4
2,454,499	-				-1.3
2,454,696	+		CCNA_02309	0.53	+1.4
2,454,766	-		CCNA_02309	0.74	+1.1
2,454,800	+		CCNA_02309	0.84	+0.4
2,454,802	+		CCNA_02309	0.84	+0.0
2,454,809	-		CCNA_02309	0.86	-1.5
2,454,813	+		CCNA_02309	0.88	+1.0
2,454,848	+				-0.6
2,454,848	+				+1.3
2,454,848	+				+0.7
2,454,848	+				+1.7
2,454,850	+				+0.7
2,454,856	-				-0.2
2,454,856	-				-1.9
2,454,856	-				-1.2
2,454,870	+				+1.0
2,454,870	+				+0.1
2,454,878	-				-0.2
2,454,878	-				+0.5
2,454,878	-				+0.1
2,454,982	+				-2.2
2,454,990	-				-0.9
2,455,039	+				-0.3
2,455,050	+				+0.3
2,455,077	+				-1.7
2,455,085	-				+0.4
2,455,124	+				-2.4
2,455,126	-				-0.2
2,455,150	-				+1.0
2,455,176	+				+0.2
2,455,181	+				+0.6
2,455,189	-				+0.6
2,455,189	-				-1.3
2,455,189	-				-0.6
2,455,191	+				+1.5
2,455,217	+		CCNA_02310	0.11	+0.4
2,455,217	+		CCNA_02310	0.11	+0.7
2,455,223	+		CCNA_02310	0.11	-0.7
2,455,224	+		CCNA_02310	0.12	-0.7
2,455,231	-		CCNA_02310	0.12	-1.7
2,455,232	-		CCNA_02310	0.12	-0.7
2,455,295	+		CCNA_02310	0.15	-0.0
2,455,377	+		CCNA_02310	0.20	-1.5
2,455,385	-		CCNA_02310	0.20	-0.1
2,455,392	+		CCNA_02310	0.20	-0.7
2,455,400	-		CCNA_02310	0.21	+0.2
2,455,405	+		CCNA_02310	0.21	+0.1
2,455,413	+		CCNA_02310	0.22	+0.6
2,455,413	-		CCNA_02310	0.22	+1.4
2,455,438	-		CCNA_02310	0.23	-0.5
2,455,449	-		CCNA_02310	0.23	+0.6
2,455,454	+		CCNA_02310	0.24	-0.1
2,455,476	+		CCNA_02310	0.25	-0.9
2,455,501	+		CCNA_02310	0.26	-0.5
2,455,501	+		CCNA_02310	0.26	-0.3
2,455,537	-		CCNA_02310	0.28	+0.4
2,455,537	-		CCNA_02310	0.28	+0.2
2,455,537	-		CCNA_02310	0.28	+0.2
2,455,569	+		CCNA_02310	0.30	+0.5
2,455,579	+		CCNA_02310	0.30	+0.2
2,455,581	-		CCNA_02310	0.31	-1.2
2,455,587	-		CCNA_02310	0.31	+1.7
2,455,623	+		CCNA_02310	0.33	+1.0
2,455,623	+		CCNA_02310	0.33	+0.7
2,455,642	-		CCNA_02310	0.34	+0.8
2,455,651	+		CCNA_02310	0.34	-0.6
2,455,701	+		CCNA_02310	0.37	-0.1
2,455,709	-		CCNA_02310	0.37	+2.0
2,455,778	+		CCNA_02310	0.41	-0.1
2,455,796	+		CCNA_02310	0.42	-1.0
2,455,796	+		CCNA_02310	0.42	-0.6
2,455,796	+		CCNA_02310	0.42	+0.4
2,455,796	+		CCNA_02310	0.42	-1.5
2,455,796	+		CCNA_02310	0.42	-0.9
2,455,796	+		CCNA_02310	0.42	-0.1
2,455,796	+		CCNA_02310	0.42	-1.1
2,455,796	+		CCNA_02310	0.42	-0.4
2,455,804	-		CCNA_02310	0.42	-0.8
2,455,804	-		CCNA_02310	0.42	-1.2
2,455,850	+		CCNA_02310	0.45	+1.0
2,455,904	+		CCNA_02310	0.48	-1.4
2,455,912	-		CCNA_02310	0.48	-1.2
2,455,939	+		CCNA_02310	0.50	-1.1
2,455,954	+		CCNA_02310	0.50	-2.3
2,455,988	-		CCNA_02310	0.52	+1.4
2,456,004	+		CCNA_02310	0.53	+1.4
2,456,011	-		CCNA_02310	0.53	+1.2
2,456,018	+		CCNA_02310	0.54	-1.4
2,456,088	+		CCNA_02310	0.58	-0.1
2,456,101	-		CCNA_02310	0.58	-0.0
2,456,105	+		CCNA_02310	0.58	-0.8
2,456,176	-		CCNA_02310	0.62	-1.6
2,456,176	-		CCNA_02310	0.62	-1.3
2,456,179	-		CCNA_02310	0.62	-0.8
2,456,179	-		CCNA_02310	0.62	-1.9
2,456,189	+		CCNA_02310	0.63	+1.5
2,456,189	+		CCNA_02310	0.63	-0.7
2,456,189	+		CCNA_02310	0.63	-0.6
2,456,197	-		CCNA_02310	0.63	-0.2
2,456,208	-		CCNA_02310	0.64	-0.1
2,456,213	-		CCNA_02310	0.64	-0.8
2,456,221	+		CCNA_02310	0.65	+0.6
2,456,226	+		CCNA_02310	0.65	-1.1
2,456,229	-		CCNA_02310	0.65	-3.1
2,456,229	-		CCNA_02310	0.65	+1.0
2,456,236	+		CCNA_02310	0.65	-0.3
2,456,236	+		CCNA_02310	0.65	-1.7
2,456,246	+		CCNA_02310	0.66	+0.4
2,456,246	+		CCNA_02310	0.66	+0.7
2,456,246	+		CCNA_02310	0.66	+0.2
2,456,254	-		CCNA_02310	0.66	+0.4
2,456,254	-		CCNA_02310	0.66	-0.4
2,456,274	+		CCNA_02310	0.67	+0.0
2,456,333	-		CCNA_02310	0.71	+0.0
2,456,356	-		CCNA_02310	0.72	+1.9
2,456,356	-		CCNA_02310	0.72	-1.4
2,456,375	-		CCNA_02310	0.73	+0.0
2,456,408	+		CCNA_02310	0.75	-1.9
2,456,429	+		CCNA_02310	0.76	+0.2
2,456,429	+				+0.2
2,456,429	+		CCNA_02310	0.76	-1.6
2,456,436	+		CCNA_02310	0.76	-0.8
2,456,436	+		CCNA_02310	0.76	-1.3
2,456,437	-		CCNA_02310	0.76	+0.4
2,456,437	-		CCNA_02310	0.76	+0.3
2,456,437	-		CCNA_02310	0.76	-1.0
2,456,441	+		CCNA_02310	0.76	-0.9
2,456,441	+		CCNA_02310	0.76	-1.6
2,456,441	+		CCNA_02310	0.76	+0.2
2,456,444	-		CCNA_02310	0.76	-0.8
2,456,444	-		CCNA_02310	0.76	-0.9
2,456,444	-		CCNA_02310	0.76	+0.3
2,456,444	-		CCNA_02310	0.76	+0.2
2,456,444	-		CCNA_02310	0.76	-0.4
2,456,449	-		CCNA_02310	0.77	+0.2
2,456,449	-		CCNA_02310	0.77	+0.7
2,456,449	-		CCNA_02310	0.77	-1.2
2,456,449	-		CCNA_02310	0.77	-1.5
2,456,449	-		CCNA_02310	0.77	-1.0
2,456,449	-		CCNA_02310	0.77	-1.4
2,456,449	-		CCNA_02310	0.77	-0.8
2,456,449	-		CCNA_02310	0.77	-0.6
2,456,449	-		CCNA_02310	0.77	-0.4
2,456,449	-		CCNA_02310	0.77	-0.6
2,456,449	-		CCNA_02310	0.77	+0.0
2,456,492	-		CCNA_02310	0.79	-2.0
2,456,492	-		CCNA_02310	0.79	-0.4
2,456,492	-		CCNA_02310	0.79	-1.5
2,456,492	-		CCNA_02310	0.79	-2.0
2,456,492	-		CCNA_02310	0.79	-0.9
2,456,492	-		CCNA_02310	0.79	-1.9
2,456,492	-		CCNA_02310	0.79	-0.4
2,456,492	-		CCNA_02310	0.79	-0.1
2,456,492	-		CCNA_02310	0.79	-1.8
2,456,510	-		CCNA_02310	0.80	-0.1
2,456,514	+		CCNA_02310	0.80	-2.6
2,456,569	+		CCNA_02310	0.83	-3.4
2,456,600	+		CCNA_02310	0.85	+0.4
2,456,602	-		CCNA_02310	0.85	-1.8
2,456,607	-		CCNA_02310	0.85	-0.2
2,456,608	-		CCNA_02310	0.85	+0.4
2,456,635	-		CCNA_02310	0.87	-0.8
2,456,659	-		CCNA_02310	0.88	-0.1
2,456,674	-		CCNA_02310	0.89	+0.3
2,456,675	+		CCNA_02310	0.89	-1.1
2,456,702	+				-0.1
2,456,747	-				-0.7
2,456,759	+				-1.9
2,456,768	-				-0.9
2,456,772	+				-1.9
2,456,803	+				-2.1
2,456,846	+				+0.2
2,456,846	+				-1.0
2,456,846	+				-0.7
2,456,846	+				-1.2
2,456,860	-				-1.7
2,456,875	-				-1.0
2,456,880	+				+0.1
2,456,942	-				-0.9
2,456,961	+		CCNA_R0054	0.12	+0.9
2,456,989	+		CCNA_R0054	0.49	+1.1
2,457,030	-				-0.8
2,457,094	+				-1.0
2,457,268	+		CCNA_02311	0.52	+0.1
2,457,287	-		CCNA_02311	0.57	-0.9
2,457,292	-		CCNA_02311	0.59	-0.1
2,457,435	-				-1.0
2,457,470	+				-0.6
2,457,485	+				-1.1
2,457,595	-		CCNA_02312	0.11	+0.6
2,457,600	-		CCNA_02312	0.12	+1.1
2,457,607	+		CCNA_02312	0.13	+0.8
2,457,612	+		CCNA_02312	0.13	+0.9
2,457,612	+		CCNA_02312	0.13	-0.2
2,457,620	-		CCNA_02312	0.14	+0.9
2,457,620	-		CCNA_02312	0.14	+1.1
2,457,620	-		CCNA_02312	0.14	+0.5
2,457,622	+		CCNA_02312	0.14	+1.2
2,457,645	-		CCNA_02312	0.17	+0.4
2,457,667	+		CCNA_02312	0.19	+1.7
2,457,667	+		CCNA_02312	0.19	-0.1
2,457,681	+		CCNA_02312	0.21	-0.9
2,457,701	-		CCNA_02312	0.23	+1.4
2,457,706	-		CCNA_02312	0.24	+0.9
2,457,782	+		CCNA_02312	0.32	-1.5
2,457,789	-		CCNA_02312	0.33	+0.2
2,457,800	-		CCNA_02312	0.34	-0.1
2,457,824	-		CCNA_02312	0.37	+0.2
2,457,858	-		CCNA_02312	0.41	+0.0
2,457,878	-		CCNA_02312	0.43	+0.2