Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01922

Experiment: PYE with Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0001 mg/ml
2,066,325	-		CCNA_01920	0.81	-1.6
2,066,342	+		CCNA_01920	0.82	-0.9
2,066,366	+		CCNA_01920	0.82	-0.4
2,066,425	-		CCNA_01920	0.84	+0.2
2,066,432	-		CCNA_01920	0.84	+0.5
2,066,432	-		CCNA_01920	0.84	+0.9
2,066,432	-		CCNA_01920	0.84	+0.8
2,066,437	-		CCNA_01920	0.84	-0.5
2,066,500	+		CCNA_01920	0.86	+0.1
2,066,527	+		CCNA_01920	0.87	-0.4
2,066,597	-		CCNA_01920	0.89	+0.6
2,066,607	+		CCNA_01920	0.89	-0.2
2,066,610	-		CCNA_01920	0.89	-0.7
2,066,659	+				-1.2
2,066,666	+				-0.8
2,066,676	+				-1.0
2,066,684	-				+0.4
2,066,684	-				+1.6
2,066,684	-				+2.1
2,066,684	-				-1.1
2,066,684	-				-0.2
2,066,684	-				+1.6
2,066,861	-				-1.4
2,066,894	+				-0.9
2,066,902	-				+1.1
2,066,902	-				+0.1
2,066,907	-				+1.0
2,066,914	+				-2.3
2,066,922	-				+0.5
2,066,922	-				+0.6
2,066,929	+				+0.4
2,067,044	-		CCNA_01921	0.19	+0.7
2,067,269	+				-0.5
2,067,286	+				+0.6
2,067,299	-				-0.1
2,067,316	-				+0.2
2,067,334	+				-0.4
2,067,334	+				-0.9
2,067,334	+				-0.6
2,067,349	+				-0.6
2,067,352	-				+0.4
2,067,416	-		CCNA_01922	0.15	-0.9
2,067,603	-		CCNA_01922	0.41	-1.9
2,067,610	+		CCNA_01922	0.42	-0.7
2,067,635	-		CCNA_01922	0.45	-0.9
2,067,732	+		CCNA_01922	0.58	-0.2
2,067,747	+		CCNA_01922	0.61	+1.2
2,067,753	-		CCNA_01922	0.61	-0.6
2,067,768	+		CCNA_01922	0.63	-0.1
2,067,785	+		CCNA_01922	0.66	+1.2
2,067,803	-		CCNA_01922	0.68	+0.2
2,067,807	+		CCNA_01922	0.69	-1.4
2,067,807	+		CCNA_01922	0.69	+0.4
2,067,807	+		CCNA_01922	0.69	-0.9
2,067,811	-		CCNA_01922	0.69	-1.1
2,067,815	-		CCNA_01922	0.70	+1.1
2,067,815	-		CCNA_01922	0.70	+0.5
2,067,825	-		CCNA_01922	0.71	-0.0
2,067,890	-		CCNA_01922	0.80	-0.3
2,067,933	+		CCNA_01922	0.86	-0.6
2,067,940	+		CCNA_01922	0.87	-0.9
2,067,943	-		CCNA_01922	0.87	+1.1
2,067,958	-		CCNA_01922	0.89	-1.4
2,067,958	-		CCNA_01922	0.89	-0.6
2,067,985	-				-0.7
2,067,985	-				-0.4
2,067,985	-				-0.4
2,068,015	-				-1.0
2,068,038	-				+0.1
2,068,100	+				+1.1
2,068,132	+				+1.3
2,068,145	+				+1.4
2,068,145	+				+1.3
2,068,148	-				+1.6
2,068,186	+				+1.9
2,068,193	+				+1.9
2,068,201	-				-0.5
2,068,217	+				+0.8
2,068,217	+				+1.5
2,068,217	+				+0.8
2,068,217	+				+3.5
2,068,218	+				+1.2
2,068,225	-				-2.0
2,068,233	+				+0.4
2,068,244	+				+0.6
2,068,251	-				-0.4
2,068,271	+				+1.0
2,068,271	+				+0.7
2,068,279	-				-1.2
2,068,279	-				-0.6
2,068,292	+				+1.3
2,068,305	-				+0.9
2,068,319	+		CCNA_01923	0.10	+0.9
2,068,319	+		CCNA_01923	0.10	+1.5
2,068,319	+		CCNA_01923	0.10	+1.6
2,068,319	+		CCNA_01923	0.10	+1.5
2,068,327	-		CCNA_01923	0.11	-0.7
2,068,351	+		CCNA_01923	0.12	+2.3
2,068,363	-		CCNA_01923	0.13	-0.8
2,068,366	+		CCNA_01923	0.13	+1.1
2,068,395	-		CCNA_01923	0.15	-0.2
2,068,401	+		CCNA_01923	0.16	+1.0
2,068,402	-		CCNA_01923	0.16	-0.5
2,068,462	+		CCNA_01923	0.20	+1.2
2,068,462	+		CCNA_01923	0.20	+2.2
2,068,462	+		CCNA_01923	0.20	+2.8
2,068,462	+		CCNA_01923	0.20	+1.4
2,068,462	+		CCNA_01923	0.20	+1.8
2,068,470	-		CCNA_01923	0.20	+0.1
2,068,470	-		CCNA_01923	0.20	+0.4
2,068,480	-		CCNA_01923	0.21	+0.4
2,068,575	-		CCNA_01923	0.27	+1.6
2,068,598	+		CCNA_01923	0.28	+1.0
2,068,657	+		CCNA_01923	0.32	+0.8
2,068,769	-		CCNA_01923	0.39	-1.3
2,068,824	-		CCNA_01923	0.43	-0.8
2,068,836	+		CCNA_01923	0.44	+1.0
2,068,850	+		CCNA_01923	0.45	+2.2
2,068,857	-		CCNA_01923	0.45	-1.3
2,068,893	-		CCNA_01923	0.47	-2.2
2,068,926	-		CCNA_01923	0.49	-1.7
2,068,926	-		CCNA_01923	0.49	-0.2
2,068,958	+		CCNA_01923	0.52	+1.4
2,068,987	+		CCNA_01923	0.53	+1.9
2,069,011	+		CCNA_01923	0.55	+1.4
2,069,011	+		CCNA_01923	0.55	+1.4
2,069,011	+		CCNA_01923	0.55	-0.5