Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_840 and Ac3H11_841 are separated by 17 nucleotides Ac3H11_841 and Ac3H11_842 are separated by 181 nucleotides
Ac3H11_840 - putative cinnamoyl-CoA reductase, at 121,717 to 122,745
_840
Ac3H11_841 - hypothetical protein, at 122,763 to 123,155
_841
Ac3H11_842 - Predicted transcriptional regulator, at 123,337 to 124,068
_842
Position (kb) 122
123
124 Strain fitness (log2 ratio) -2
-1
0
1
2 at 121.788 kb on - strand at 121.788 kb on - strand at 121.798 kb on + strand at 121.859 kb on + strand, within Ac3H11_840 at 121.859 kb on + strand, within Ac3H11_840 at 121.859 kb on + strand, within Ac3H11_840 at 121.859 kb on + strand, within Ac3H11_840 at 121.859 kb on + strand, within Ac3H11_840 at 121.859 kb on + strand, within Ac3H11_840 at 121.859 kb on + strand, within Ac3H11_840 at 121.859 kb on + strand, within Ac3H11_840 at 121.859 kb on + strand, within Ac3H11_840 at 121.860 kb on - strand, within Ac3H11_840 at 121.860 kb on - strand, within Ac3H11_840 at 121.860 kb on - strand, within Ac3H11_840 at 121.860 kb on - strand, within Ac3H11_840 at 121.860 kb on - strand, within Ac3H11_840 at 122.009 kb on + strand, within Ac3H11_840 at 122.279 kb on + strand, within Ac3H11_840 at 122.279 kb on + strand, within Ac3H11_840 at 122.280 kb on - strand, within Ac3H11_840 at 122.280 kb on - strand, within Ac3H11_840 at 122.280 kb on - strand, within Ac3H11_840 at 122.701 kb on + strand at 122.701 kb on + strand at 122.701 kb on + strand at 122.701 kb on + strand at 122.701 kb on + strand at 122.701 kb on + strand at 122.702 kb on - strand at 122.702 kb on - strand at 122.702 kb on - strand at 122.702 kb on - strand at 122.702 kb on - strand at 122.702 kb on - strand at 122.726 kb on + strand at 122.726 kb on + strand at 123.036 kb on - strand, within Ac3H11_841 at 123.118 kb on + strand at 123.119 kb on - strand at 123.119 kb on - strand at 123.119 kb on - strand at 123.323 kb on - strand at 123.323 kb on - strand at 123.398 kb on + strand at 123.398 kb on + strand at 123.566 kb on + strand, within Ac3H11_842 at 123.567 kb on - strand, within Ac3H11_842 at 123.593 kb on + strand, within Ac3H11_842 at 123.593 kb on + strand, within Ac3H11_842 at 123.593 kb on + strand, within Ac3H11_842 at 123.594 kb on - strand, within Ac3H11_842 at 123.594 kb on - strand, within Ac3H11_842 at 123.594 kb on - strand, within Ac3H11_842 at 123.594 kb on - strand, within Ac3H11_842 at 123.594 kb on - strand, within Ac3H11_842 at 123.704 kb on + strand, within Ac3H11_842 at 123.704 kb on + strand, within Ac3H11_842 at 123.704 kb on + strand, within Ac3H11_842 at 123.705 kb on - strand, within Ac3H11_842 at 123.705 kb on - strand, within Ac3H11_842 at 123.735 kb on - strand, within Ac3H11_842 at 123.735 kb on - strand, within Ac3H11_842 at 123.735 kb on - strand, within Ac3H11_842 at 124.004 kb on + strand at 124.004 kb on + strand at 124.004 kb on + strand at 124.005 kb on - strand at 124.005 kb on - strand at 124.005 kb on - strand at 124.005 kb on - strand at 124.114 kb on - strand at 124.114 kb on - strand at 124.118 kb on - strand at 124.118 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 121,788 - -0.4 121,788 - -1.8 121,798 + +0.1 121,859 + Ac3H11_840 0.14 -0.7 121,859 + Ac3H11_840 0.14 -0.0 121,859 + Ac3H11_840 0.14 -0.8 121,859 + Ac3H11_840 0.14 -1.2 121,859 + Ac3H11_840 0.14 -0.3 121,859 + Ac3H11_840 0.14 -1.0 121,859 + Ac3H11_840 0.14 -0.2 121,859 + Ac3H11_840 0.14 +1.3 121,859 + Ac3H11_840 0.14 +1.0 121,860 - Ac3H11_840 0.14 -1.4 121,860 - Ac3H11_840 0.14 -1.3 121,860 - Ac3H11_840 0.14 -0.5 121,860 - Ac3H11_840 0.14 +0.9 121,860 - Ac3H11_840 0.14 -0.1 122,009 + Ac3H11_840 0.28 +0.2 122,279 + Ac3H11_840 0.55 -0.2 122,279 + Ac3H11_840 0.55 -0.3 122,280 - Ac3H11_840 0.55 +0.1 122,280 - Ac3H11_840 0.55 +0.6 122,280 - Ac3H11_840 0.55 +0.5 122,701 + +1.3 122,701 + +0.1 122,701 + +0.7 122,701 + -0.4 122,701 + +0.5 122,701 + -0.9 122,702 - +0.1 122,702 - -0.1 122,702 - -0.3 122,702 - -0.8 122,702 - +0.3 122,702 - +0.2 122,726 + -0.6 122,726 + +1.1 123,036 - Ac3H11_841 0.69 -1.1 123,118 + +0.7 123,119 - +0.3 123,119 - +0.6 123,119 - +0.2 123,323 - -0.4 123,323 - +0.2 123,398 + -0.1 123,398 + -0.6 123,566 + Ac3H11_842 0.31 +0.0 123,567 - Ac3H11_842 0.31 -0.6 123,593 + Ac3H11_842 0.35 -0.9 123,593 + Ac3H11_842 0.35 -0.9 123,593 + Ac3H11_842 0.35 -1.1 123,594 - Ac3H11_842 0.35 -0.7 123,594 - Ac3H11_842 0.35 +0.4 123,594 - Ac3H11_842 0.35 -0.7 123,594 - Ac3H11_842 0.35 +0.6 123,594 - Ac3H11_842 0.35 +0.4 123,704 + Ac3H11_842 0.50 -0.4 123,704 + Ac3H11_842 0.50 -0.3 123,704 + Ac3H11_842 0.50 -0.6 123,705 - Ac3H11_842 0.50 +0.4 123,705 - Ac3H11_842 0.50 +0.5 123,735 - Ac3H11_842 0.54 +0.1 123,735 - Ac3H11_842 0.54 +2.6 123,735 - Ac3H11_842 0.54 +0.1 124,004 + -0.2 124,004 + +0.3 124,004 + +0.5 124,005 - -0.2 124,005 - -0.3 124,005 - -0.4 124,005 - -0.9 124,114 - +0.1 124,114 - -0.1 124,118 - +1.2 124,118 - -0.3
Or see this region's nucleotide sequence