Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2184 and Ac3H11_2185 are separated by 38 nucleotides Ac3H11_2185 and Ac3H11_2186 are separated by 53 nucleotides
Ac3H11_2184 - FIG00348557: hypothetical protein, at 413,901 to 416,738
_2184
Ac3H11_2185 - hypothetical secreted protein, at 416,777 to 417,499
_2185
Ac3H11_2186 - Sensor protein basS/pmrB (EC 2.7.3.-), at 417,553 to 418,854
_2186
Position (kb) 416
417
418 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 416.269 kb on + strand, within Ac3H11_2184 at 416.353 kb on + strand, within Ac3H11_2184 at 416.354 kb on - strand, within Ac3H11_2184 at 416.738 kb on + strand at 416.738 kb on + strand at 416.738 kb on + strand at 416.738 kb on + strand at 416.739 kb on - strand at 416.766 kb on + strand at 416.766 kb on + strand at 416.766 kb on + strand at 416.767 kb on - strand at 416.767 kb on - strand at 416.767 kb on - strand at 416.767 kb on - strand at 417.181 kb on + strand, within Ac3H11_2185 at 417.182 kb on - strand, within Ac3H11_2185 at 417.263 kb on + strand, within Ac3H11_2185 at 417.263 kb on + strand, within Ac3H11_2185 at 417.264 kb on - strand, within Ac3H11_2185 at 417.525 kb on - strand at 417.686 kb on + strand, within Ac3H11_2186 at 417.686 kb on + strand, within Ac3H11_2186 at 417.687 kb on - strand, within Ac3H11_2186 at 417.687 kb on - strand, within Ac3H11_2186 at 417.687 kb on - strand, within Ac3H11_2186 at 418.385 kb on + strand, within Ac3H11_2186 at 418.385 kb on + strand, within Ac3H11_2186 at 418.385 kb on + strand, within Ac3H11_2186 at 418.385 kb on + strand, within Ac3H11_2186 at 418.385 kb on + strand, within Ac3H11_2186 at 418.386 kb on - strand, within Ac3H11_2186 at 418.386 kb on - strand, within Ac3H11_2186 at 418.386 kb on - strand, within Ac3H11_2186 at 418.386 kb on - strand, within Ac3H11_2186 at 418.386 kb on - strand, within Ac3H11_2186 at 418.386 kb on - strand, within Ac3H11_2186
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 416,269 + Ac3H11_2184 0.83 +1.2 416,353 + Ac3H11_2184 0.86 +0.5 416,354 - Ac3H11_2184 0.86 +0.4 416,738 + -0.7 416,738 + -0.4 416,738 + -0.1 416,738 + -0.9 416,739 - +0.4 416,766 + +0.4 416,766 + -1.1 416,766 + -0.9 416,767 - +0.1 416,767 - -0.4 416,767 - +0.3 416,767 - +0.2 417,181 + Ac3H11_2185 0.56 -2.3 417,182 - Ac3H11_2185 0.56 -0.7 417,263 + Ac3H11_2185 0.67 -0.2 417,263 + Ac3H11_2185 0.67 +0.2 417,264 - Ac3H11_2185 0.67 -0.1 417,525 - +0.9 417,686 + Ac3H11_2186 0.10 +0.0 417,686 + Ac3H11_2186 0.10 +0.6 417,687 - Ac3H11_2186 0.10 +3.2 417,687 - Ac3H11_2186 0.10 +3.4 417,687 - Ac3H11_2186 0.10 +3.6 418,385 + Ac3H11_2186 0.64 +0.1 418,385 + Ac3H11_2186 0.64 +0.5 418,385 + Ac3H11_2186 0.64 +0.4 418,385 + Ac3H11_2186 0.64 +0.6 418,385 + Ac3H11_2186 0.64 +0.4 418,386 - Ac3H11_2186 0.64 +1.9 418,386 - Ac3H11_2186 0.64 +0.1 418,386 - Ac3H11_2186 0.64 +2.0 418,386 - Ac3H11_2186 0.64 +2.1 418,386 - Ac3H11_2186 0.64 +2.3 418,386 - Ac3H11_2186 0.64 +1.7
Or see this region's nucleotide sequence