Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS24840 and AZOBR_RS24845 are separated by 136 nucleotides AZOBR_RS24845 and AZOBR_RS24850 are separated by 63 nucleotides
AZOBR_RS24840: AZOBR_RS24840 - hypothetical protein, at 638,208 to 638,648
_RS24840
AZOBR_RS24845: AZOBR_RS24845 - hypothetical protein, at 638,785 to 639,573
_RS24845
AZOBR_RS24850: AZOBR_RS24850 - 3-isopropylmalate dehydrogenase, at 639,637 to 640,437
_RS24850
Position (kb) 639
640
641 Strain fitness (log2 ratio) -1
0
1
2
3 at 638.704 kb on + strand at 638.704 kb on + strand at 638.704 kb on + strand at 638.704 kb on + strand at 638.738 kb on + strand at 638.738 kb on + strand at 638.738 kb on + strand at 638.738 kb on + strand at 638.739 kb on - strand at 638.739 kb on - strand at 638.739 kb on - strand at 638.739 kb on - strand at 638.739 kb on - strand at 638.739 kb on - strand at 638.960 kb on - strand, within AZOBR_RS24845 at 639.040 kb on + strand, within AZOBR_RS24845 at 639.049 kb on + strand, within AZOBR_RS24845 at 639.049 kb on + strand, within AZOBR_RS24845 at 639.074 kb on - strand, within AZOBR_RS24845 at 639.214 kb on + strand, within AZOBR_RS24845 at 639.214 kb on + strand, within AZOBR_RS24845 at 639.215 kb on - strand, within AZOBR_RS24845 at 639.215 kb on - strand, within AZOBR_RS24845 at 639.233 kb on - strand, within AZOBR_RS24845 at 639.337 kb on + strand, within AZOBR_RS24845 at 639.338 kb on - strand, within AZOBR_RS24845 at 639.338 kb on - strand, within AZOBR_RS24845 at 639.767 kb on + strand, within AZOBR_RS24850 at 639.923 kb on + strand, within AZOBR_RS24850 at 639.924 kb on - strand, within AZOBR_RS24850 at 639.924 kb on - strand, within AZOBR_RS24850 at 639.956 kb on + strand, within AZOBR_RS24850 at 639.956 kb on + strand, within AZOBR_RS24850 at 639.957 kb on - strand, within AZOBR_RS24850 at 640.271 kb on + strand, within AZOBR_RS24850 at 640.272 kb on - strand, within AZOBR_RS24850 at 640.272 kb on - strand, within AZOBR_RS24850 at 640.272 kb on - strand, within AZOBR_RS24850 at 640.272 kb on - strand, within AZOBR_RS24850 at 640.646 kb on - strand at 640.646 kb on - strand at 640.661 kb on + strand at 640.736 kb on + strand at 640.737 kb on - strand at 641.016 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 638,704 + +0.1 638,704 + +0.5 638,704 + +0.6 638,704 + +0.1 638,738 + +0.1 638,738 + +0.4 638,738 + +0.0 638,738 + +0.5 638,739 - +0.1 638,739 - +0.2 638,739 - -0.0 638,739 - -0.1 638,739 - +1.5 638,739 - +0.3 638,960 - AZOBR_RS24845 0.22 +0.5 639,040 + AZOBR_RS24845 0.32 +0.2 639,049 + AZOBR_RS24845 0.33 -0.0 639,049 + AZOBR_RS24845 0.33 +0.4 639,074 - AZOBR_RS24845 0.37 +0.5 639,214 + AZOBR_RS24845 0.54 +0.5 639,214 + AZOBR_RS24845 0.54 +0.3 639,215 - AZOBR_RS24845 0.54 -0.0 639,215 - AZOBR_RS24845 0.54 +0.1 639,233 - AZOBR_RS24845 0.57 +0.2 639,337 + AZOBR_RS24845 0.70 -0.2 639,338 - AZOBR_RS24845 0.70 +0.5 639,338 - AZOBR_RS24845 0.70 +0.3 639,767 + AZOBR_RS24850 0.16 +0.7 639,923 + AZOBR_RS24850 0.36 +0.6 639,924 - AZOBR_RS24850 0.36 +0.4 639,924 - AZOBR_RS24850 0.36 +0.2 639,956 + AZOBR_RS24850 0.40 +0.2 639,956 + AZOBR_RS24850 0.40 +0.1 639,957 - AZOBR_RS24850 0.40 +1.5 640,271 + AZOBR_RS24850 0.79 -0.4 640,272 - AZOBR_RS24850 0.79 +0.5 640,272 - AZOBR_RS24850 0.79 +0.4 640,272 - AZOBR_RS24850 0.79 +1.2 640,272 - AZOBR_RS24850 0.79 +0.1 640,646 - +3.2 640,646 - -0.5 640,661 + -0.5 640,736 + -0.6 640,737 - +0.0 641,016 - -0.3
Or see this region's nucleotide sequence