Experiment: Fusidic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21520 and ABZR86_RS21525 are separated by 202 nucleotides ABZR86_RS21525 and ABZR86_RS21530 are separated by 31 nucleotides ABZR86_RS21530 and ABZR86_RS21535 are separated by 1 nucleotides ABZR86_RS21535 and ABZR86_RS21540 are separated by 211 nucleotides
ABZR86_RS21520: ABZR86_RS21520 - penicillin acylase family protein, at 269,747 to 272,167
_RS21520
ABZR86_RS21525: ABZR86_RS21525 - DUF4019 domain-containing protein, at 272,370 to 272,864
_RS21525
ABZR86_RS21530: ABZR86_RS21530 - type II toxin-antitoxin system HipA family toxin, at 272,896 to 274,206
_RS21530
ABZR86_RS21535: ABZR86_RS21535 - hypothetical protein, at 274,208 to 274,576
_RS21535
ABZR86_RS21540: ABZR86_RS21540 - S9 family peptidase, at 274,788 to 276,824
_RS21540
Position (kb) 272
273
274
275 Strain fitness (log2 ratio) -2
-1
0
1
2 at 272.063 kb on + strand at 272.064 kb on - strand at 272.066 kb on + strand at 272.066 kb on + strand at 272.066 kb on + strand at 272.067 kb on - strand at 272.067 kb on - strand at 272.228 kb on + strand at 272.228 kb on + strand at 272.228 kb on + strand at 272.229 kb on - strand at 272.229 kb on - strand at 272.229 kb on - strand at 272.307 kb on + strand at 272.307 kb on + strand at 272.307 kb on + strand at 272.308 kb on - strand at 272.308 kb on - strand at 272.308 kb on - strand at 272.308 kb on - strand at 272.308 kb on - strand at 272.308 kb on - strand at 272.308 kb on - strand at 272.308 kb on - strand at 272.308 kb on - strand at 272.369 kb on + strand at 272.369 kb on + strand at 272.369 kb on + strand at 272.369 kb on + strand at 272.369 kb on + strand at 272.369 kb on + strand at 272.369 kb on + strand at 272.370 kb on - strand at 272.370 kb on - strand at 272.370 kb on - strand at 272.586 kb on + strand, within ABZR86_RS21525 at 272.587 kb on - strand, within ABZR86_RS21525 at 272.587 kb on - strand, within ABZR86_RS21525 at 272.587 kb on - strand, within ABZR86_RS21525 at 272.782 kb on - strand, within ABZR86_RS21525 at 272.782 kb on - strand, within ABZR86_RS21525 at 272.782 kb on - strand, within ABZR86_RS21525 at 272.782 kb on - strand, within ABZR86_RS21525 at 273.227 kb on + strand, within ABZR86_RS21530 at 273.227 kb on + strand, within ABZR86_RS21530 at 273.228 kb on - strand, within ABZR86_RS21530 at 273.480 kb on + strand, within ABZR86_RS21530 at 273.480 kb on + strand, within ABZR86_RS21530 at 273.480 kb on + strand, within ABZR86_RS21530 at 273.480 kb on + strand, within ABZR86_RS21530 at 273.481 kb on - strand, within ABZR86_RS21530 at 273.481 kb on - strand, within ABZR86_RS21530 at 273.481 kb on - strand, within ABZR86_RS21530 at 273.481 kb on - strand, within ABZR86_RS21530 at 273.481 kb on - strand, within ABZR86_RS21530 at 273.481 kb on - strand, within ABZR86_RS21530 at 273.483 kb on + strand, within ABZR86_RS21530 at 273.483 kb on + strand, within ABZR86_RS21530 at 273.483 kb on + strand, within ABZR86_RS21530 at 273.483 kb on + strand, within ABZR86_RS21530 at 273.483 kb on + strand, within ABZR86_RS21530 at 273.483 kb on + strand, within ABZR86_RS21530 at 273.483 kb on + strand, within ABZR86_RS21530 at 273.483 kb on + strand, within ABZR86_RS21530 at 273.484 kb on - strand, within ABZR86_RS21530 at 273.484 kb on - strand, within ABZR86_RS21530 at 273.625 kb on - strand, within ABZR86_RS21530 at 273.625 kb on - strand, within ABZR86_RS21530 at 273.625 kb on - strand, within ABZR86_RS21530 at 273.625 kb on - strand, within ABZR86_RS21530 at 273.893 kb on + strand, within ABZR86_RS21530 at 273.894 kb on - strand, within ABZR86_RS21530 at 273.894 kb on - strand, within ABZR86_RS21530 at 273.894 kb on - strand, within ABZR86_RS21530 at 273.896 kb on + strand, within ABZR86_RS21530 at 273.896 kb on + strand, within ABZR86_RS21530 at 273.897 kb on - strand, within ABZR86_RS21530 at 273.897 kb on - strand, within ABZR86_RS21530 at 273.902 kb on + strand, within ABZR86_RS21530 at 273.902 kb on + strand, within ABZR86_RS21530 at 273.902 kb on + strand, within ABZR86_RS21530 at 273.902 kb on + strand, within ABZR86_RS21530 at 273.902 kb on + strand, within ABZR86_RS21530 at 273.902 kb on + strand, within ABZR86_RS21530 at 273.903 kb on - strand, within ABZR86_RS21530 at 273.903 kb on - strand, within ABZR86_RS21530 at 273.903 kb on - strand, within ABZR86_RS21530 at 274.100 kb on + strand at 274.151 kb on + strand at 274.151 kb on + strand at 274.151 kb on + strand at 274.151 kb on + strand at 274.151 kb on + strand at 274.152 kb on - strand at 274.152 kb on - strand at 274.152 kb on - strand at 274.152 kb on - strand at 274.152 kb on - strand at 274.152 kb on - strand at 274.178 kb on + strand at 274.178 kb on + strand at 274.179 kb on - strand at 274.179 kb on - strand at 274.179 kb on - strand at 274.582 kb on + strand at 274.618 kb on - strand at 274.622 kb on - strand at 274.993 kb on + strand, within ABZR86_RS21540 at 274.993 kb on + strand, within ABZR86_RS21540 at 274.993 kb on + strand, within ABZR86_RS21540 at 274.993 kb on + strand, within ABZR86_RS21540 at 274.993 kb on + strand, within ABZR86_RS21540 at 274.993 kb on + strand, within ABZR86_RS21540 at 274.993 kb on + strand, within ABZR86_RS21540 at 274.993 kb on + strand, within ABZR86_RS21540 at 274.993 kb on + strand, within ABZR86_RS21540 at 274.993 kb on + strand, within ABZR86_RS21540 at 274.993 kb on + strand, within ABZR86_RS21540 at 274.993 kb on + strand, within ABZR86_RS21540 at 274.993 kb on + strand, within ABZR86_RS21540 at 274.993 kb on + strand, within ABZR86_RS21540 at 274.994 kb on - strand, within ABZR86_RS21540 at 274.994 kb on - strand, within ABZR86_RS21540 at 274.994 kb on - strand, within ABZR86_RS21540 at 274.994 kb on - strand, within ABZR86_RS21540 at 274.994 kb on - strand, within ABZR86_RS21540 at 274.994 kb on - strand, within ABZR86_RS21540 at 274.994 kb on - strand, within ABZR86_RS21540 at 274.994 kb on - strand, within ABZR86_RS21540 at 275.182 kb on + strand, within ABZR86_RS21540 at 275.182 kb on + strand, within ABZR86_RS21540 at 275.182 kb on + strand, within ABZR86_RS21540 at 275.183 kb on - strand, within ABZR86_RS21540 at 275.183 kb on - strand, within ABZR86_RS21540 at 275.183 kb on - strand, within ABZR86_RS21540
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.4 mg/ml remove 272,063 + -0.6 272,064 - +0.2 272,066 + -0.5 272,066 + +2.2 272,066 + -0.2 272,067 - +1.6 272,067 - -0.9 272,228 + +0.5 272,228 + -0.1 272,228 + -0.4 272,229 - -0.0 272,229 - -0.2 272,229 - +0.8 272,307 + -0.9 272,307 + +0.4 272,307 + -1.4 272,308 - +0.1 272,308 - +0.9 272,308 - -0.2 272,308 - +2.0 272,308 - +0.8 272,308 - +0.1 272,308 - -0.0 272,308 - -0.1 272,308 - +0.3 272,369 + -0.6 272,369 + +0.7 272,369 + +1.8 272,369 + -1.0 272,369 + -0.1 272,369 + +0.5 272,369 + -1.6 272,370 - -0.6 272,370 - -0.3 272,370 - -0.6 272,586 + ABZR86_RS21525 0.44 +0.1 272,587 - ABZR86_RS21525 0.44 -0.5 272,587 - ABZR86_RS21525 0.44 -0.0 272,587 - ABZR86_RS21525 0.44 +0.9 272,782 - ABZR86_RS21525 0.83 -0.6 272,782 - ABZR86_RS21525 0.83 -0.3 272,782 - ABZR86_RS21525 0.83 -0.7 272,782 - ABZR86_RS21525 0.83 +1.3 273,227 + ABZR86_RS21530 0.25 +0.2 273,227 + ABZR86_RS21530 0.25 -0.5 273,228 - ABZR86_RS21530 0.25 +0.3 273,480 + ABZR86_RS21530 0.45 -0.1 273,480 + ABZR86_RS21530 0.45 -0.4 273,480 + ABZR86_RS21530 0.45 -0.8 273,480 + ABZR86_RS21530 0.45 -1.0 273,481 - ABZR86_RS21530 0.45 +0.7 273,481 - ABZR86_RS21530 0.45 -0.4 273,481 - ABZR86_RS21530 0.45 +0.2 273,481 - ABZR86_RS21530 0.45 +0.5 273,481 - ABZR86_RS21530 0.45 -0.9 273,481 - ABZR86_RS21530 0.45 -0.3 273,483 + ABZR86_RS21530 0.45 +0.6 273,483 + ABZR86_RS21530 0.45 -0.4 273,483 + ABZR86_RS21530 0.45 +0.0 273,483 + ABZR86_RS21530 0.45 +0.0 273,483 + ABZR86_RS21530 0.45 +0.6 273,483 + ABZR86_RS21530 0.45 -0.5 273,483 + ABZR86_RS21530 0.45 -0.3 273,483 + ABZR86_RS21530 0.45 +0.2 273,484 - ABZR86_RS21530 0.45 +1.4 273,484 - ABZR86_RS21530 0.45 +0.4 273,625 - ABZR86_RS21530 0.56 +2.2 273,625 - ABZR86_RS21530 0.56 -0.2 273,625 - ABZR86_RS21530 0.56 -0.3 273,625 - ABZR86_RS21530 0.56 +0.8 273,893 + ABZR86_RS21530 0.76 +0.9 273,894 - ABZR86_RS21530 0.76 +0.2 273,894 - ABZR86_RS21530 0.76 -0.2 273,894 - ABZR86_RS21530 0.76 +0.1 273,896 + ABZR86_RS21530 0.76 +1.2 273,896 + ABZR86_RS21530 0.76 +0.3 273,897 - ABZR86_RS21530 0.76 -0.4 273,897 - ABZR86_RS21530 0.76 +0.9 273,902 + ABZR86_RS21530 0.77 +0.3 273,902 + ABZR86_RS21530 0.77 +0.3 273,902 + ABZR86_RS21530 0.77 -0.3 273,902 + ABZR86_RS21530 0.77 +0.0 273,902 + ABZR86_RS21530 0.77 -0.5 273,902 + ABZR86_RS21530 0.77 +0.1 273,903 - ABZR86_RS21530 0.77 +0.2 273,903 - ABZR86_RS21530 0.77 +0.2 273,903 - ABZR86_RS21530 0.77 +0.1 274,100 + -0.6 274,151 + +0.2 274,151 + -0.8 274,151 + -0.5 274,151 + +0.3 274,151 + -0.6 274,152 - -0.1 274,152 - +0.5 274,152 - -0.6 274,152 - +0.6 274,152 - +0.2 274,152 - +0.6 274,178 + +0.3 274,178 + -0.6 274,179 - -0.2 274,179 - -1.7 274,179 - +0.1 274,582 + -2.0 274,618 - +1.0 274,622 - +0.4 274,993 + ABZR86_RS21540 0.10 -0.1 274,993 + ABZR86_RS21540 0.10 -0.3 274,993 + ABZR86_RS21540 0.10 -0.6 274,993 + ABZR86_RS21540 0.10 +0.3 274,993 + ABZR86_RS21540 0.10 -1.0 274,993 + ABZR86_RS21540 0.10 -0.3 274,993 + ABZR86_RS21540 0.10 -0.3 274,993 + ABZR86_RS21540 0.10 +0.6 274,993 + ABZR86_RS21540 0.10 +0.5 274,993 + ABZR86_RS21540 0.10 -0.3 274,993 + ABZR86_RS21540 0.10 -0.6 274,993 + ABZR86_RS21540 0.10 +0.2 274,993 + ABZR86_RS21540 0.10 +1.4 274,993 + ABZR86_RS21540 0.10 -0.4 274,994 - ABZR86_RS21540 0.10 -0.7 274,994 - ABZR86_RS21540 0.10 +0.3 274,994 - ABZR86_RS21540 0.10 +0.1 274,994 - ABZR86_RS21540 0.10 -0.7 274,994 - ABZR86_RS21540 0.10 +1.1 274,994 - ABZR86_RS21540 0.10 +1.1 274,994 - ABZR86_RS21540 0.10 -0.7 274,994 - ABZR86_RS21540 0.10 -0.1 275,182 + ABZR86_RS21540 0.19 -0.1 275,182 + ABZR86_RS21540 0.19 +0.1 275,182 + ABZR86_RS21540 0.19 -0.1 275,183 - ABZR86_RS21540 0.19 +0.5 275,183 - ABZR86_RS21540 0.19 +0.3 275,183 - ABZR86_RS21540 0.19 -0.3
Or see this region's nucleotide sequence