Experiment: Fusidic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS11760 and ABZR86_RS11765 overlap by 1 nucleotides ABZR86_RS11765 and ABZR86_RS11770 overlap by 1 nucleotides ABZR86_RS11770 and ABZR86_RS11775 overlap by 8 nucleotides
ABZR86_RS11760: ABZR86_RS11760 - BatD family protein, at 2,636,830 to 2,638,512
_RS11760
ABZR86_RS11765: ABZR86_RS11765 - VWA domain-containing protein, at 2,638,512 to 2,640,401
_RS11765
ABZR86_RS11770: ABZR86_RS11770 - VWA domain-containing protein, at 2,640,401 to 2,641,387
_RS11770
ABZR86_RS11775: ABZR86_RS11775 - DUF4381 family protein, at 2,641,380 to 2,641,910
_RS11775
Position (kb)
2638
2639
2640
2641 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2637.561 kb on - strand, within ABZR86_RS11760 at 2637.612 kb on - strand, within ABZR86_RS11760 at 2637.906 kb on - strand, within ABZR86_RS11760 at 2637.926 kb on + strand, within ABZR86_RS11760 at 2637.927 kb on - strand, within ABZR86_RS11760 at 2637.927 kb on - strand, within ABZR86_RS11760 at 2637.927 kb on - strand, within ABZR86_RS11760 at 2637.927 kb on - strand, within ABZR86_RS11760 at 2637.954 kb on - strand, within ABZR86_RS11760 at 2638.040 kb on + strand, within ABZR86_RS11760 at 2638.040 kb on + strand, within ABZR86_RS11760 at 2638.040 kb on + strand, within ABZR86_RS11760 at 2638.041 kb on - strand, within ABZR86_RS11760 at 2638.041 kb on - strand, within ABZR86_RS11760 at 2638.076 kb on + strand, within ABZR86_RS11760 at 2638.076 kb on + strand, within ABZR86_RS11760 at 2638.076 kb on + strand, within ABZR86_RS11760 at 2638.076 kb on + strand, within ABZR86_RS11760 at 2638.076 kb on + strand, within ABZR86_RS11760 at 2638.077 kb on - strand, within ABZR86_RS11760 at 2638.077 kb on - strand, within ABZR86_RS11760 at 2638.250 kb on + strand, within ABZR86_RS11760 at 2638.250 kb on + strand, within ABZR86_RS11760 at 2638.250 kb on + strand, within ABZR86_RS11760 at 2638.251 kb on - strand, within ABZR86_RS11760 at 2638.251 kb on - strand, within ABZR86_RS11760 at 2638.389 kb on + strand at 2638.390 kb on - strand at 2638.390 kb on - strand at 2638.390 kb on - strand at 2638.390 kb on - strand at 2638.390 kb on - strand at 2638.390 kb on - strand at 2638.550 kb on - strand at 2639.122 kb on + strand, within ABZR86_RS11765 at 2639.179 kb on + strand, within ABZR86_RS11765 at 2639.180 kb on - strand, within ABZR86_RS11765 at 2639.594 kb on - strand, within ABZR86_RS11765 at 2639.594 kb on - strand, within ABZR86_RS11765 at 2639.733 kb on + strand, within ABZR86_RS11765 at 2639.734 kb on - strand, within ABZR86_RS11765 at 2639.986 kb on + strand, within ABZR86_RS11765 at 2640.074 kb on + strand, within ABZR86_RS11765 at 2640.075 kb on - strand, within ABZR86_RS11765 at 2640.137 kb on - strand, within ABZR86_RS11765 at 2640.328 kb on + strand at 2640.328 kb on + strand at 2640.723 kb on + strand, within ABZR86_RS11770 at 2640.724 kb on - strand, within ABZR86_RS11770 at 2640.724 kb on - strand, within ABZR86_RS11770 at 2640.945 kb on + strand, within ABZR86_RS11770 at 2640.945 kb on + strand, within ABZR86_RS11770 at 2640.946 kb on - strand, within ABZR86_RS11770 at 2640.946 kb on - strand, within ABZR86_RS11770 at 2641.166 kb on + strand, within ABZR86_RS11770 at 2641.167 kb on - strand, within ABZR86_RS11770
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.4 mg/ml remove 2,637,561 - ABZR86_RS11760 0.43 +0.7 2,637,612 - ABZR86_RS11760 0.46 +0.2 2,637,906 - ABZR86_RS11760 0.64 -0.6 2,637,926 + ABZR86_RS11760 0.65 +0.1 2,637,927 - ABZR86_RS11760 0.65 -0.1 2,637,927 - ABZR86_RS11760 0.65 +0.4 2,637,927 - ABZR86_RS11760 0.65 +0.2 2,637,927 - ABZR86_RS11760 0.65 +0.1 2,637,954 - ABZR86_RS11760 0.67 +1.3 2,638,040 + ABZR86_RS11760 0.72 -0.6 2,638,040 + ABZR86_RS11760 0.72 +0.2 2,638,040 + ABZR86_RS11760 0.72 -0.1 2,638,041 - ABZR86_RS11760 0.72 -0.4 2,638,041 - ABZR86_RS11760 0.72 +0.7 2,638,076 + ABZR86_RS11760 0.74 +0.1 2,638,076 + ABZR86_RS11760 0.74 +0.4 2,638,076 + ABZR86_RS11760 0.74 +3.2 2,638,076 + ABZR86_RS11760 0.74 -0.4 2,638,076 + ABZR86_RS11760 0.74 +1.2 2,638,077 - ABZR86_RS11760 0.74 -0.0 2,638,077 - ABZR86_RS11760 0.74 +0.1 2,638,250 + ABZR86_RS11760 0.84 +0.7 2,638,250 + ABZR86_RS11760 0.84 +1.1 2,638,250 + ABZR86_RS11760 0.84 -0.1 2,638,251 - ABZR86_RS11760 0.84 +1.5 2,638,251 - ABZR86_RS11760 0.84 +1.2 2,638,389 + +0.1 2,638,390 - -0.8 2,638,390 - -0.2 2,638,390 - +1.1 2,638,390 - +0.0 2,638,390 - -0.1 2,638,390 - +0.4 2,638,550 - +0.7 2,639,122 + ABZR86_RS11765 0.32 +0.6 2,639,179 + ABZR86_RS11765 0.35 +0.4 2,639,180 - ABZR86_RS11765 0.35 -0.1 2,639,594 - ABZR86_RS11765 0.57 -0.7 2,639,594 - ABZR86_RS11765 0.57 +0.3 2,639,733 + ABZR86_RS11765 0.65 -0.2 2,639,734 - ABZR86_RS11765 0.65 -0.3 2,639,986 + ABZR86_RS11765 0.78 +0.4 2,640,074 + ABZR86_RS11765 0.83 +1.0 2,640,075 - ABZR86_RS11765 0.83 +1.6 2,640,137 - ABZR86_RS11765 0.86 -0.8 2,640,328 + +0.4 2,640,328 + +1.1 2,640,723 + ABZR86_RS11770 0.33 -0.7 2,640,724 - ABZR86_RS11770 0.33 -0.1 2,640,724 - ABZR86_RS11770 0.33 +0.2 2,640,945 + ABZR86_RS11770 0.55 +0.7 2,640,945 + ABZR86_RS11770 0.55 -0.8 2,640,946 - ABZR86_RS11770 0.55 -0.0 2,640,946 - ABZR86_RS11770 0.55 -0.1 2,641,166 + ABZR86_RS11770 0.78 +0.2 2,641,167 - ABZR86_RS11770 0.78 +1.6
Or see this region's nucleotide sequence