Experiment: Fusidic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10890 and ABZR86_RS10895 overlap by 4 nucleotides ABZR86_RS10895 and ABZR86_RS10900 overlap by 13 nucleotides
ABZR86_RS10890: ABZR86_RS10890 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 2,415,979 to 2,417,034
_RS10890
ABZR86_RS10895: ABZR86_RS10895 - bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase, at 2,417,031 to 2,417,552
_RS10895
ABZR86_RS10900: ABZR86_RS10900 - cobyric acid synthase, at 2,417,540 to 2,419,015
_RS10900
Position (kb)
2417
2418 Strain fitness (log2 ratio)
-1
0
1
2 at 2416.278 kb on + strand, within ABZR86_RS10890 at 2416.280 kb on + strand, within ABZR86_RS10890 at 2416.280 kb on + strand, within ABZR86_RS10890 at 2416.280 kb on + strand, within ABZR86_RS10890 at 2416.280 kb on + strand, within ABZR86_RS10890 at 2416.281 kb on - strand, within ABZR86_RS10890 at 2416.281 kb on - strand, within ABZR86_RS10890 at 2416.281 kb on - strand, within ABZR86_RS10890 at 2416.281 kb on - strand, within ABZR86_RS10890 at 2416.281 kb on - strand, within ABZR86_RS10890 at 2416.281 kb on - strand, within ABZR86_RS10890 at 2416.281 kb on - strand, within ABZR86_RS10890 at 2416.281 kb on - strand, within ABZR86_RS10890 at 2416.281 kb on - strand, within ABZR86_RS10890 at 2416.281 kb on - strand, within ABZR86_RS10890 at 2416.281 kb on - strand, within ABZR86_RS10890 at 2416.281 kb on - strand, within ABZR86_RS10890 at 2416.488 kb on + strand, within ABZR86_RS10890 at 2416.730 kb on - strand, within ABZR86_RS10890 at 2417.009 kb on - strand at 2417.009 kb on - strand at 2417.186 kb on + strand, within ABZR86_RS10895 at 2417.187 kb on - strand, within ABZR86_RS10895 at 2417.464 kb on + strand, within ABZR86_RS10895 at 2417.464 kb on + strand, within ABZR86_RS10895 at 2417.464 kb on + strand, within ABZR86_RS10895 at 2417.464 kb on + strand, within ABZR86_RS10895 at 2417.465 kb on - strand, within ABZR86_RS10895 at 2417.465 kb on - strand, within ABZR86_RS10895 at 2417.736 kb on + strand, within ABZR86_RS10900 at 2417.737 kb on - strand, within ABZR86_RS10900 at 2417.737 kb on - strand, within ABZR86_RS10900 at 2417.747 kb on + strand, within ABZR86_RS10900 at 2417.748 kb on - strand, within ABZR86_RS10900 at 2418.337 kb on - strand, within ABZR86_RS10900
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.4 mg/ml remove 2,416,278 + ABZR86_RS10890 0.28 -1.4 2,416,280 + ABZR86_RS10890 0.29 -1.4 2,416,280 + ABZR86_RS10890 0.29 +0.4 2,416,280 + ABZR86_RS10890 0.29 -0.3 2,416,280 + ABZR86_RS10890 0.29 -0.1 2,416,281 - ABZR86_RS10890 0.29 -0.3 2,416,281 - ABZR86_RS10890 0.29 -0.4 2,416,281 - ABZR86_RS10890 0.29 +0.3 2,416,281 - ABZR86_RS10890 0.29 +0.5 2,416,281 - ABZR86_RS10890 0.29 -0.7 2,416,281 - ABZR86_RS10890 0.29 +0.4 2,416,281 - ABZR86_RS10890 0.29 -0.0 2,416,281 - ABZR86_RS10890 0.29 -0.3 2,416,281 - ABZR86_RS10890 0.29 +0.4 2,416,281 - ABZR86_RS10890 0.29 +0.8 2,416,281 - ABZR86_RS10890 0.29 -0.1 2,416,281 - ABZR86_RS10890 0.29 +0.2 2,416,488 + ABZR86_RS10890 0.48 -0.0 2,416,730 - ABZR86_RS10890 0.71 -0.6 2,417,009 - -0.1 2,417,009 - +0.6 2,417,186 + ABZR86_RS10895 0.30 -1.5 2,417,187 - ABZR86_RS10895 0.30 +2.1 2,417,464 + ABZR86_RS10895 0.83 +0.5 2,417,464 + ABZR86_RS10895 0.83 -0.6 2,417,464 + ABZR86_RS10895 0.83 -0.1 2,417,464 + ABZR86_RS10895 0.83 +0.4 2,417,465 - ABZR86_RS10895 0.83 +1.3 2,417,465 - ABZR86_RS10895 0.83 -0.2 2,417,736 + ABZR86_RS10900 0.13 +1.3 2,417,737 - ABZR86_RS10900 0.13 -0.1 2,417,737 - ABZR86_RS10900 0.13 +0.1 2,417,747 + ABZR86_RS10900 0.14 -0.8 2,417,748 - ABZR86_RS10900 0.14 -0.4 2,418,337 - ABZR86_RS10900 0.54 +0.2
Or see this region's nucleotide sequence