Experiment: Fusidic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10680 and ABZR86_RS10685 are separated by 408 nucleotides ABZR86_RS10685 and ABZR86_RS10690 are separated by 90 nucleotides
ABZR86_RS10680: ABZR86_RS10680 - riboflavin synthase, at 2,372,942 to 2,373,586
_RS10680
ABZR86_RS10685: ABZR86_RS10685 - LysR family transcriptional regulator, at 2,373,995 to 2,374,897
_RS10685
ABZR86_RS10690: ABZR86_RS10690 - NAD(P)-dependent alcohol dehydrogenase, at 2,374,988 to 2,375,998
_RS10690
Position (kb)
2373
2374
2375 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2373.903 kb on + strand at 2373.941 kb on - strand at 2373.941 kb on - strand at 2373.996 kb on + strand at 2373.996 kb on + strand at 2373.996 kb on + strand at 2373.996 kb on + strand at 2373.996 kb on + strand at 2374.149 kb on + strand, within ABZR86_RS10685 at 2374.149 kb on + strand, within ABZR86_RS10685 at 2374.149 kb on + strand, within ABZR86_RS10685 at 2374.149 kb on + strand, within ABZR86_RS10685 at 2374.150 kb on - strand, within ABZR86_RS10685 at 2374.150 kb on - strand, within ABZR86_RS10685 at 2374.150 kb on - strand, within ABZR86_RS10685 at 2374.150 kb on - strand, within ABZR86_RS10685 at 2374.150 kb on - strand, within ABZR86_RS10685 at 2374.363 kb on - strand, within ABZR86_RS10685 at 2374.384 kb on - strand, within ABZR86_RS10685 at 2374.384 kb on - strand, within ABZR86_RS10685 at 2374.384 kb on - strand, within ABZR86_RS10685 at 2374.384 kb on - strand, within ABZR86_RS10685 at 2374.482 kb on + strand, within ABZR86_RS10685 at 2374.482 kb on + strand, within ABZR86_RS10685 at 2374.482 kb on + strand, within ABZR86_RS10685 at 2374.482 kb on + strand, within ABZR86_RS10685 at 2374.483 kb on - strand, within ABZR86_RS10685 at 2374.483 kb on - strand, within ABZR86_RS10685 at 2374.483 kb on - strand, within ABZR86_RS10685 at 2374.495 kb on - strand, within ABZR86_RS10685 at 2374.495 kb on - strand, within ABZR86_RS10685 at 2374.497 kb on - strand, within ABZR86_RS10685 at 2374.569 kb on + strand, within ABZR86_RS10685 at 2374.932 kb on - strand at 2374.997 kb on + strand at 2374.997 kb on + strand at 2374.998 kb on - strand at 2374.998 kb on - strand at 2374.998 kb on - strand at 2374.998 kb on - strand at 2374.998 kb on - strand at 2374.998 kb on - strand at 2375.138 kb on + strand, within ABZR86_RS10690 at 2375.138 kb on + strand, within ABZR86_RS10690 at 2375.249 kb on + strand, within ABZR86_RS10690 at 2375.250 kb on - strand, within ABZR86_RS10690 at 2375.250 kb on - strand, within ABZR86_RS10690 at 2375.250 kb on - strand, within ABZR86_RS10690 at 2375.250 kb on - strand, within ABZR86_RS10690 at 2375.345 kb on + strand, within ABZR86_RS10690 at 2375.345 kb on + strand, within ABZR86_RS10690 at 2375.354 kb on + strand, within ABZR86_RS10690 at 2375.380 kb on + strand, within ABZR86_RS10690 at 2375.381 kb on - strand, within ABZR86_RS10690 at 2375.608 kb on + strand, within ABZR86_RS10690 at 2375.608 kb on + strand, within ABZR86_RS10690 at 2375.608 kb on + strand, within ABZR86_RS10690 at 2375.609 kb on - strand, within ABZR86_RS10690 at 2375.613 kb on - strand, within ABZR86_RS10690 at 2375.613 kb on - strand, within ABZR86_RS10690 at 2375.815 kb on - strand, within ABZR86_RS10690
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.4 mg/ml remove 2,373,903 + -0.3 2,373,941 - +1.2 2,373,941 - -0.7 2,373,996 + +0.2 2,373,996 + +1.0 2,373,996 + -0.1 2,373,996 + -0.3 2,373,996 + -0.2 2,374,149 + ABZR86_RS10685 0.17 -0.7 2,374,149 + ABZR86_RS10685 0.17 +0.0 2,374,149 + ABZR86_RS10685 0.17 +0.4 2,374,149 + ABZR86_RS10685 0.17 -1.9 2,374,150 - ABZR86_RS10685 0.17 -0.4 2,374,150 - ABZR86_RS10685 0.17 -0.4 2,374,150 - ABZR86_RS10685 0.17 -0.6 2,374,150 - ABZR86_RS10685 0.17 +0.1 2,374,150 - ABZR86_RS10685 0.17 +1.1 2,374,363 - ABZR86_RS10685 0.41 +0.3 2,374,384 - ABZR86_RS10685 0.43 -1.2 2,374,384 - ABZR86_RS10685 0.43 +0.0 2,374,384 - ABZR86_RS10685 0.43 +0.1 2,374,384 - ABZR86_RS10685 0.43 +0.8 2,374,482 + ABZR86_RS10685 0.54 -0.8 2,374,482 + ABZR86_RS10685 0.54 +0.2 2,374,482 + ABZR86_RS10685 0.54 -0.6 2,374,482 + ABZR86_RS10685 0.54 +0.7 2,374,483 - ABZR86_RS10685 0.54 -0.6 2,374,483 - ABZR86_RS10685 0.54 -0.5 2,374,483 - ABZR86_RS10685 0.54 +0.5 2,374,495 - ABZR86_RS10685 0.55 -0.3 2,374,495 - ABZR86_RS10685 0.55 -0.0 2,374,497 - ABZR86_RS10685 0.56 +0.2 2,374,569 + ABZR86_RS10685 0.64 +2.2 2,374,932 - +0.4 2,374,997 + +0.2 2,374,997 + +0.8 2,374,998 - -0.1 2,374,998 - +0.8 2,374,998 - +2.5 2,374,998 - +0.1 2,374,998 - -1.8 2,374,998 - +0.1 2,375,138 + ABZR86_RS10690 0.15 +1.3 2,375,138 + ABZR86_RS10690 0.15 -0.2 2,375,249 + ABZR86_RS10690 0.26 -0.0 2,375,250 - ABZR86_RS10690 0.26 -0.0 2,375,250 - ABZR86_RS10690 0.26 -0.8 2,375,250 - ABZR86_RS10690 0.26 +0.1 2,375,250 - ABZR86_RS10690 0.26 -0.2 2,375,345 + ABZR86_RS10690 0.35 -0.2 2,375,345 + ABZR86_RS10690 0.35 +0.3 2,375,354 + ABZR86_RS10690 0.36 -0.2 2,375,380 + ABZR86_RS10690 0.39 -1.0 2,375,381 - ABZR86_RS10690 0.39 +0.0 2,375,608 + ABZR86_RS10690 0.61 -0.0 2,375,608 + ABZR86_RS10690 0.61 -0.3 2,375,608 + ABZR86_RS10690 0.61 -0.2 2,375,609 - ABZR86_RS10690 0.61 -0.0 2,375,613 - ABZR86_RS10690 0.62 +0.9 2,375,613 - ABZR86_RS10690 0.62 +0.2 2,375,815 - ABZR86_RS10690 0.82 +0.0
Or see this region's nucleotide sequence