Experiment: Fusidic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08765 and ABZR86_RS08770 are separated by 102 nucleotides ABZR86_RS08770 and ABZR86_RS08775 overlap by 4 nucleotides ABZR86_RS08775 and ABZR86_RS08780 overlap by 4 nucleotides
ABZR86_RS08765: ABZR86_RS08765 - GTP cyclohydrolase FolE2, at 1,961,864 to 1,962,817
_RS08765
ABZR86_RS08770: ABZR86_RS08770 - squalene/phytoene synthase family protein, at 1,962,920 to 1,963,771
_RS08770
ABZR86_RS08775: ABZR86_RS08775 - HAD-IA family hydrolase, at 1,963,768 to 1,964,448
_RS08775
ABZR86_RS08780: ABZR86_RS08780 - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 1,964,445 to 1,965,152
_RS08780
Position (kb)
1962
1963
1964 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1962.273 kb on - strand, within ABZR86_RS08765 at 1962.348 kb on + strand, within ABZR86_RS08765 at 1962.349 kb on - strand, within ABZR86_RS08765 at 1962.366 kb on + strand, within ABZR86_RS08765 at 1962.367 kb on - strand, within ABZR86_RS08765 at 1962.389 kb on + strand, within ABZR86_RS08765 at 1962.389 kb on + strand, within ABZR86_RS08765 at 1962.390 kb on - strand, within ABZR86_RS08765 at 1962.390 kb on - strand, within ABZR86_RS08765 at 1962.390 kb on - strand, within ABZR86_RS08765 at 1962.597 kb on + strand, within ABZR86_RS08765 at 1962.597 kb on + strand, within ABZR86_RS08765 at 1962.597 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.811 kb on + strand at 1962.812 kb on - strand at 1962.812 kb on - strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.866 kb on - strand at 1962.894 kb on + strand at 1962.894 kb on + strand at 1962.895 kb on - strand at 1962.895 kb on - strand at 1963.735 kb on - strand at 1963.893 kb on - strand, within ABZR86_RS08775 at 1964.205 kb on - strand, within ABZR86_RS08775 at 1964.205 kb on - strand, within ABZR86_RS08775 at 1964.217 kb on - strand, within ABZR86_RS08775
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.4 mg/ml remove 1,962,273 - ABZR86_RS08765 0.43 -0.1 1,962,348 + ABZR86_RS08765 0.51 +0.2 1,962,349 - ABZR86_RS08765 0.51 +1.1 1,962,366 + ABZR86_RS08765 0.53 -0.7 1,962,367 - ABZR86_RS08765 0.53 -0.9 1,962,389 + ABZR86_RS08765 0.55 +0.2 1,962,389 + ABZR86_RS08765 0.55 -1.4 1,962,390 - ABZR86_RS08765 0.55 +0.5 1,962,390 - ABZR86_RS08765 0.55 -2.3 1,962,390 - ABZR86_RS08765 0.55 -0.5 1,962,597 + ABZR86_RS08765 0.77 -0.0 1,962,597 + ABZR86_RS08765 0.77 +0.4 1,962,597 + ABZR86_RS08765 0.77 +0.5 1,962,610 + ABZR86_RS08765 0.78 -0.6 1,962,610 + ABZR86_RS08765 0.78 -0.9 1,962,610 + ABZR86_RS08765 0.78 -0.8 1,962,610 + ABZR86_RS08765 0.78 -0.1 1,962,610 + ABZR86_RS08765 0.78 -0.6 1,962,610 + ABZR86_RS08765 0.78 -0.2 1,962,610 + ABZR86_RS08765 0.78 -0.2 1,962,610 + ABZR86_RS08765 0.78 -0.3 1,962,610 + ABZR86_RS08765 0.78 -0.2 1,962,610 + ABZR86_RS08765 0.78 +1.3 1,962,610 + ABZR86_RS08765 0.78 -0.7 1,962,610 + ABZR86_RS08765 0.78 +0.1 1,962,610 + ABZR86_RS08765 0.78 +0.5 1,962,611 - ABZR86_RS08765 0.78 +1.9 1,962,611 - ABZR86_RS08765 0.78 -0.2 1,962,611 - ABZR86_RS08765 0.78 +1.9 1,962,611 - ABZR86_RS08765 0.78 +0.5 1,962,611 - ABZR86_RS08765 0.78 -0.5 1,962,611 - ABZR86_RS08765 0.78 +0.7 1,962,611 - ABZR86_RS08765 0.78 +0.5 1,962,611 - ABZR86_RS08765 0.78 -0.9 1,962,611 - ABZR86_RS08765 0.78 -0.3 1,962,611 - ABZR86_RS08765 0.78 -0.8 1,962,611 - ABZR86_RS08765 0.78 +1.6 1,962,811 + +0.2 1,962,812 - -0.7 1,962,812 - +0.2 1,962,813 + +0.6 1,962,813 + -0.3 1,962,813 + -0.2 1,962,813 + +0.4 1,962,813 + +0.1 1,962,813 + -0.5 1,962,813 + +0.3 1,962,813 + -0.2 1,962,813 + -0.6 1,962,813 + -0.5 1,962,813 + -0.0 1,962,813 + -0.3 1,962,814 - +0.2 1,962,814 - -0.3 1,962,814 - +0.3 1,962,814 - +0.5 1,962,814 - -0.5 1,962,814 - -0.0 1,962,814 - +1.0 1,962,814 - +0.5 1,962,814 - -0.2 1,962,814 - -1.8 1,962,814 - -0.2 1,962,814 - +0.7 1,962,866 - -0.1 1,962,894 + -0.7 1,962,894 + +0.8 1,962,895 - -1.1 1,962,895 - -1.2 1,963,735 - +0.4 1,963,893 - ABZR86_RS08775 0.18 -0.8 1,964,205 - ABZR86_RS08775 0.64 +0.3 1,964,205 - ABZR86_RS08775 0.64 +0.4 1,964,217 - ABZR86_RS08775 0.66 -1.3
Or see this region's nucleotide sequence