Experiment: Fusidic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03585 and ABZR86_RS03590 are separated by 5 nucleotides ABZR86_RS03590 and ABZR86_RS03595 are separated by 89 nucleotides ABZR86_RS03595 and ABZR86_RS03600 are separated by 100 nucleotides ABZR86_RS03600 and ABZR86_RS03605 are separated by 152 nucleotides
ABZR86_RS03585: ABZR86_RS03585 - FdhF/YdeP family oxidoreductase, at 765,018 to 767,342
_RS03585
ABZR86_RS03590: ABZR86_RS03590 - formate dehydrogenase accessory sulfurtransferase FdhD, at 767,348 to 768,166
_RS03590
ABZR86_RS03595: ABZR86_RS03595 - FAD-containing oxidoreductase, at 768,256 to 769,626
_RS03595
ABZR86_RS03600: ABZR86_RS03600 - TMEM175 family protein, at 769,727 to 770,368
_RS03600
ABZR86_RS03605: ABZR86_RS03605 - autotransporter domain-containing protein, at 770,521 to 773,406
_RS03605
Position (kb) 768
769
770 Strain fitness (log2 ratio) -1
0
1
2 at 767.283 kb on + strand at 767.284 kb on - strand at 767.453 kb on + strand, within ABZR86_RS03590 at 767.513 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.595 kb on - strand, within ABZR86_RS03590 at 767.595 kb on - strand, within ABZR86_RS03590 at 767.595 kb on - strand, within ABZR86_RS03590 at 767.595 kb on - strand, within ABZR86_RS03590 at 767.865 kb on + strand, within ABZR86_RS03590 at 767.866 kb on - strand, within ABZR86_RS03590 at 767.866 kb on - strand, within ABZR86_RS03590 at 767.866 kb on - strand, within ABZR86_RS03590 at 767.866 kb on - strand, within ABZR86_RS03590 at 767.975 kb on + strand, within ABZR86_RS03590 at 767.975 kb on + strand, within ABZR86_RS03590 at 767.975 kb on + strand, within ABZR86_RS03590 at 768.116 kb on + strand at 768.117 kb on - strand at 768.117 kb on - strand at 768.117 kb on - strand at 768.427 kb on + strand, within ABZR86_RS03595 at 768.428 kb on - strand, within ABZR86_RS03595 at 768.428 kb on - strand, within ABZR86_RS03595 at 768.438 kb on + strand, within ABZR86_RS03595 at 768.439 kb on - strand, within ABZR86_RS03595 at 768.439 kb on - strand, within ABZR86_RS03595 at 768.461 kb on - strand, within ABZR86_RS03595 at 768.621 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.795 kb on + strand, within ABZR86_RS03595 at 768.795 kb on + strand, within ABZR86_RS03595 at 768.796 kb on - strand, within ABZR86_RS03595 at 769.053 kb on - strand, within ABZR86_RS03595 at 769.068 kb on + strand, within ABZR86_RS03595 at 769.161 kb on + strand, within ABZR86_RS03595 at 769.161 kb on + strand, within ABZR86_RS03595 at 769.200 kb on + strand, within ABZR86_RS03595 at 769.200 kb on + strand, within ABZR86_RS03595 at 769.200 kb on + strand, within ABZR86_RS03595 at 769.207 kb on - strand, within ABZR86_RS03595 at 769.213 kb on + strand, within ABZR86_RS03595 at 769.213 kb on + strand, within ABZR86_RS03595 at 769.289 kb on - strand, within ABZR86_RS03595 at 769.524 kb on + strand at 769.524 kb on + strand at 769.525 kb on - strand at 769.531 kb on + strand at 769.546 kb on + strand at 769.547 kb on - strand at 769.625 kb on - strand at 769.684 kb on + strand at 769.685 kb on - strand at 769.685 kb on - strand at 769.715 kb on + strand at 769.716 kb on - strand at 769.716 kb on - strand at 769.716 kb on - strand at 769.965 kb on + strand, within ABZR86_RS03600 at 769.965 kb on + strand, within ABZR86_RS03600 at 769.966 kb on - strand, within ABZR86_RS03600 at 769.966 kb on - strand, within ABZR86_RS03600 at 769.966 kb on - strand, within ABZR86_RS03600 at 769.990 kb on - strand, within ABZR86_RS03600 at 770.104 kb on + strand, within ABZR86_RS03600 at 770.182 kb on - strand, within ABZR86_RS03600 at 770.182 kb on - strand, within ABZR86_RS03600 at 770.450 kb on - strand at 770.455 kb on - strand at 770.455 kb on - strand at 770.517 kb on - strand at 770.522 kb on + strand at 770.523 kb on - strand at 770.588 kb on + strand at 770.589 kb on - strand at 770.589 kb on - strand at 770.589 kb on - strand at 770.589 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.4 mg/ml remove 767,283 + +1.3 767,284 - +0.9 767,453 + ABZR86_RS03590 0.13 +2.0 767,513 + ABZR86_RS03590 0.20 -0.5 767,594 + ABZR86_RS03590 0.30 +0.7 767,594 + ABZR86_RS03590 0.30 +0.3 767,594 + ABZR86_RS03590 0.30 +1.7 767,594 + ABZR86_RS03590 0.30 +0.2 767,594 + ABZR86_RS03590 0.30 +0.5 767,595 - ABZR86_RS03590 0.30 +0.1 767,595 - ABZR86_RS03590 0.30 -0.0 767,595 - ABZR86_RS03590 0.30 -0.7 767,595 - ABZR86_RS03590 0.30 -0.4 767,865 + ABZR86_RS03590 0.63 -0.9 767,866 - ABZR86_RS03590 0.63 -1.6 767,866 - ABZR86_RS03590 0.63 -0.2 767,866 - ABZR86_RS03590 0.63 -0.6 767,866 - ABZR86_RS03590 0.63 -0.6 767,975 + ABZR86_RS03590 0.77 +1.1 767,975 + ABZR86_RS03590 0.77 -0.3 767,975 + ABZR86_RS03590 0.77 -0.3 768,116 + -0.4 768,117 - +0.4 768,117 - -0.8 768,117 - -0.2 768,427 + ABZR86_RS03595 0.12 +0.6 768,428 - ABZR86_RS03595 0.13 +0.5 768,428 - ABZR86_RS03595 0.13 +0.7 768,438 + ABZR86_RS03595 0.13 -0.3 768,439 - ABZR86_RS03595 0.13 -0.3 768,439 - ABZR86_RS03595 0.13 +0.1 768,461 - ABZR86_RS03595 0.15 +0.5 768,621 + ABZR86_RS03595 0.27 +0.5 768,793 + ABZR86_RS03595 0.39 -1.2 768,793 + ABZR86_RS03595 0.39 -0.3 768,793 + ABZR86_RS03595 0.39 +0.1 768,793 + ABZR86_RS03595 0.39 +0.6 768,793 + ABZR86_RS03595 0.39 +0.0 768,794 - ABZR86_RS03595 0.39 -0.1 768,794 - ABZR86_RS03595 0.39 +0.0 768,794 - ABZR86_RS03595 0.39 +0.8 768,794 - ABZR86_RS03595 0.39 +0.5 768,794 - ABZR86_RS03595 0.39 -0.5 768,794 - ABZR86_RS03595 0.39 -0.9 768,794 - ABZR86_RS03595 0.39 +0.0 768,794 - ABZR86_RS03595 0.39 +0.2 768,795 + ABZR86_RS03595 0.39 +1.2 768,795 + ABZR86_RS03595 0.39 +0.3 768,796 - ABZR86_RS03595 0.39 -0.2 769,053 - ABZR86_RS03595 0.58 -0.7 769,068 + ABZR86_RS03595 0.59 -0.5 769,161 + ABZR86_RS03595 0.66 -0.1 769,161 + ABZR86_RS03595 0.66 -1.2 769,200 + ABZR86_RS03595 0.69 -0.6 769,200 + ABZR86_RS03595 0.69 +0.0 769,200 + ABZR86_RS03595 0.69 +0.0 769,207 - ABZR86_RS03595 0.69 +0.6 769,213 + ABZR86_RS03595 0.70 +0.4 769,213 + ABZR86_RS03595 0.70 -0.1 769,289 - ABZR86_RS03595 0.75 -0.2 769,524 + +0.4 769,524 + +1.1 769,525 - +1.3 769,531 + -0.2 769,546 + +0.5 769,547 - -0.5 769,625 - +1.0 769,684 + +0.5 769,685 - -0.3 769,685 - +0.5 769,715 + +0.6 769,716 - -1.0 769,716 - -0.2 769,716 - +0.1 769,965 + ABZR86_RS03600 0.37 -1.7 769,965 + ABZR86_RS03600 0.37 -0.3 769,966 - ABZR86_RS03600 0.37 +1.0 769,966 - ABZR86_RS03600 0.37 -0.4 769,966 - ABZR86_RS03600 0.37 +1.2 769,990 - ABZR86_RS03600 0.41 -0.9 770,104 + ABZR86_RS03600 0.59 -1.1 770,182 - ABZR86_RS03600 0.71 -0.3 770,182 - ABZR86_RS03600 0.71 -1.6 770,450 - +0.6 770,455 - -0.4 770,455 - -0.3 770,517 - -0.0 770,522 + -1.1 770,523 - +0.2 770,588 + -0.2 770,589 - +0.4 770,589 - +0.7 770,589 - +0.2 770,589 - +0.8
Or see this region's nucleotide sequence