Experiment: Fusidic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02815 and ABZR86_RS02820 are separated by 123 nucleotides ABZR86_RS02820 and ABZR86_RS02825 are separated by 42 nucleotides ABZR86_RS02825 and ABZR86_RS02830 are separated by 59 nucleotides
ABZR86_RS02815: ABZR86_RS02815 - asparagine synthase B, at 568,238 to 569,917
_RS02815
ABZR86_RS02820: ABZR86_RS02820 - peptide chain release factor 2, at 570,041 to 571,166
_RS02820
ABZR86_RS02825: ABZR86_RS02825 - hypothetical protein, at 571,209 to 571,631
_RS02825
ABZR86_RS02830: ABZR86_RS02830 - hypothetical protein, at 571,691 to 572,806
_RS02830
Position (kb) 570
571
572 Strain fitness (log2 ratio) -2
-1
0
1
2 at 569.150 kb on + strand, within ABZR86_RS02815 at 569.150 kb on + strand, within ABZR86_RS02815 at 569.150 kb on + strand, within ABZR86_RS02815 at 569.150 kb on + strand, within ABZR86_RS02815 at 569.151 kb on - strand, within ABZR86_RS02815 at 569.151 kb on - strand, within ABZR86_RS02815 at 569.197 kb on + strand, within ABZR86_RS02815 at 569.207 kb on + strand, within ABZR86_RS02815 at 569.207 kb on + strand, within ABZR86_RS02815 at 569.207 kb on + strand, within ABZR86_RS02815 at 569.208 kb on - strand, within ABZR86_RS02815 at 569.330 kb on + strand, within ABZR86_RS02815 at 569.330 kb on + strand, within ABZR86_RS02815 at 569.330 kb on + strand, within ABZR86_RS02815 at 569.331 kb on - strand, within ABZR86_RS02815 at 569.331 kb on - strand, within ABZR86_RS02815 at 569.331 kb on - strand, within ABZR86_RS02815 at 569.331 kb on - strand, within ABZR86_RS02815 at 569.331 kb on - strand, within ABZR86_RS02815 at 569.331 kb on - strand, within ABZR86_RS02815 at 569.338 kb on + strand, within ABZR86_RS02815 at 569.339 kb on - strand, within ABZR86_RS02815 at 569.510 kb on + strand, within ABZR86_RS02815 at 569.511 kb on - strand, within ABZR86_RS02815 at 569.511 kb on - strand, within ABZR86_RS02815 at 569.511 kb on - strand, within ABZR86_RS02815 at 569.511 kb on - strand, within ABZR86_RS02815 at 569.627 kb on + strand, within ABZR86_RS02815 at 569.738 kb on + strand, within ABZR86_RS02815 at 569.738 kb on + strand, within ABZR86_RS02815 at 569.738 kb on + strand, within ABZR86_RS02815 at 569.738 kb on + strand, within ABZR86_RS02815 at 569.739 kb on - strand, within ABZR86_RS02815 at 569.744 kb on + strand, within ABZR86_RS02815 at 569.915 kb on + strand at 569.915 kb on + strand at 569.916 kb on - strand at 569.982 kb on + strand at 569.982 kb on + strand at 569.983 kb on - strand at 569.983 kb on - strand at 569.983 kb on - strand at 570.005 kb on + strand at 570.032 kb on + strand at 570.032 kb on + strand at 571.838 kb on + strand, within ABZR86_RS02830 at 571.838 kb on + strand, within ABZR86_RS02830 at 571.838 kb on + strand, within ABZR86_RS02830 at 571.838 kb on + strand, within ABZR86_RS02830 at 571.838 kb on + strand, within ABZR86_RS02830 at 571.853 kb on + strand, within ABZR86_RS02830 at 571.853 kb on + strand, within ABZR86_RS02830 at 571.853 kb on + strand, within ABZR86_RS02830 at 571.853 kb on + strand, within ABZR86_RS02830 at 571.898 kb on + strand, within ABZR86_RS02830 at 571.898 kb on + strand, within ABZR86_RS02830 at 571.919 kb on + strand, within ABZR86_RS02830 at 571.990 kb on + strand, within ABZR86_RS02830
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.4 mg/ml remove 569,150 + ABZR86_RS02815 0.54 -0.7 569,150 + ABZR86_RS02815 0.54 -2.2 569,150 + ABZR86_RS02815 0.54 +0.0 569,150 + ABZR86_RS02815 0.54 +0.2 569,151 - ABZR86_RS02815 0.54 +0.3 569,151 - ABZR86_RS02815 0.54 +2.2 569,197 + ABZR86_RS02815 0.57 +0.2 569,207 + ABZR86_RS02815 0.58 +1.2 569,207 + ABZR86_RS02815 0.58 -0.1 569,207 + ABZR86_RS02815 0.58 +0.7 569,208 - ABZR86_RS02815 0.58 -0.5 569,330 + ABZR86_RS02815 0.65 +0.1 569,330 + ABZR86_RS02815 0.65 -0.7 569,330 + ABZR86_RS02815 0.65 -1.4 569,331 - ABZR86_RS02815 0.65 +0.7 569,331 - ABZR86_RS02815 0.65 -1.1 569,331 - ABZR86_RS02815 0.65 -0.5 569,331 - ABZR86_RS02815 0.65 +0.4 569,331 - ABZR86_RS02815 0.65 -0.7 569,331 - ABZR86_RS02815 0.65 +0.4 569,338 + ABZR86_RS02815 0.65 -1.1 569,339 - ABZR86_RS02815 0.66 +0.5 569,510 + ABZR86_RS02815 0.76 +0.1 569,511 - ABZR86_RS02815 0.76 +0.2 569,511 - ABZR86_RS02815 0.76 -0.1 569,511 - ABZR86_RS02815 0.76 +0.8 569,511 - ABZR86_RS02815 0.76 +0.6 569,627 + ABZR86_RS02815 0.83 -0.2 569,738 + ABZR86_RS02815 0.89 -0.7 569,738 + ABZR86_RS02815 0.89 -0.5 569,738 + ABZR86_RS02815 0.89 +0.5 569,738 + ABZR86_RS02815 0.89 -1.5 569,739 - ABZR86_RS02815 0.89 -0.5 569,744 + ABZR86_RS02815 0.90 -0.5 569,915 + -1.2 569,915 + -2.0 569,916 - -0.3 569,982 + -0.2 569,982 + -0.5 569,983 - +0.6 569,983 - -0.2 569,983 - +0.3 570,005 + +0.3 570,032 + -0.8 570,032 + -0.8 571,838 + ABZR86_RS02830 0.13 -0.9 571,838 + ABZR86_RS02830 0.13 -0.1 571,838 + ABZR86_RS02830 0.13 +0.1 571,838 + ABZR86_RS02830 0.13 -0.9 571,838 + ABZR86_RS02830 0.13 -0.2 571,853 + ABZR86_RS02830 0.15 -0.8 571,853 + ABZR86_RS02830 0.15 -0.5 571,853 + ABZR86_RS02830 0.15 -0.1 571,853 + ABZR86_RS02830 0.15 -2.7 571,898 + ABZR86_RS02830 0.19 -0.7 571,898 + ABZR86_RS02830 0.19 -0.7 571,919 + ABZR86_RS02830 0.20 -0.2 571,990 + ABZR86_RS02830 0.27 -0.0
Or see this region's nucleotide sequence